Suncus etruscus (white-toothed pygmy shrew): 126027362
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Entry
126027362 CDS
T09902
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126027362 (CTCF)
03036 Chromosome and associated proteins [BR:
setr03036
]
126027362 (CTCF)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126027362 (CTCF)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126027362 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
126027362
NCBI-ProteinID:
XP_049642325
LinkDB
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Position
14:62092372..62168059
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AA seq
726 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNNSVQM
VMMEQLDSTLLQMKTEVMEGTVAPEAETAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPELQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPSAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEAQPAATDAPNGDLTPEMI
LSMMDR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaggagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgccgggaagggggccaggaagaagatgcttgccatcta
ccccagaaccagactgatgggggtgaggtggtccaagatgtcaataacagtgtacagatg
gtaatgatggaacaactggattctaccctgcttcagatgaagactgaagtcatggagggt
acagttgctccagaagcagagactgctgtggatgatacccagattataactttgcaggta
gtaaatatggaagaacagcccataaacataggagaactgcagcttgttcaagtacctgtt
cctgtgactgtccctgttgctactacgtcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagcgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtgggggccaatggagaagtggagacactagagcaa
ggggaacttccacctcaggaagatcctagttggcaaaaagatccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactacgttacacagaggagggcaaagat
gtggatgtatctgtctacgattttgaggaagagcagcaggagggcctgctgtcagaagtt
aatgcagagaaagtggttggtaatatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgctcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctttgtggt
agggcattcagaacagtcacccttctgaggaatcatcttaacacacacacaggtactcgt
cctcataagtgcccagactgtgacatggcctttgtaactagtggagaattagtgcggcat
cgtcgttacaaacacactcatgagaagccatttaagtgttctatgtgtgactatgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcatactggagaacgtccgttccag
tgcagtttgtgcagttatgctagcagggatacatacaagttgaaaaggcacatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgttcacttgcgaaagcagcat
tcctatattgagcaaggcaagaaatgccgatactgcgatgctgtatttcatgagcgctat
gccctcatccaacatcagaagtcacacaagaatgagaagcgctttaagtgtgatcagtgt
gattacgcttgcagacaggagagacacatgatcatgcacaaacgaacccacacaggggag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacaactccttgacatg
cacttcaaacgttaccatgatcccaacttcgttcctgcagccttcgtatgttctaagtgt
gggaaaacatttacacgccggaataccatggcaagacatgctgataattgtgctggtcca
gatggtgtagaaggggaaaatggaggggaaacaaagaagagcaagcgtggaagaaaaaga
aagatgcgttctaaaaaagaagattcttccgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaggagcctgctgtggaaattgaacctgagccagagcttcagccc
gtgaccccagccccaccacctgccaagaagcggagaggacggccccccggcagaaccaac
cagcccaaacagacccagccatcagccatcattcaggttgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcagagcccgcagagggcgag
gaggaggctcagcctgctgcaacagatgcaccaaacggagacctcacacctgagatgatc
ctcagcatgatggaccggtga
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