Suncus etruscus (white-toothed pygmy shrew): 126027373
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Entry
126027373 CDS
T09902
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126027373 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
setr01007
]
126027373 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
126027373 (KARS1)
Enzymes [BR:
setr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
126027373 (KARS1)
Amino acid related enzymes [BR:
setr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
126027373 (KARS1)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
126027373 (KARS1)
Prokaryotic type
Other AARSs
126027373 (KARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
PMFBP1_N
Dec-1
Motif
Other DBs
NCBI-GeneID:
126027373
NCBI-ProteinID:
XP_049642339
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All DBs
Position
14:complement(68738197..68757020)
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AA seq
624 aa
AA seq
DB search
MLTQAALRLVRGSLRQTAWAQWGQREPRFCQLAPFTSHKDKTLSDKRSELKRRLKAEKKV
AEKEARQKELSEKQQVQATAAATNHTTDNGVSAEEETLDPNQYYKIRSQAVQQLKVSGED
PYPHKFHVDVSLTHFINEYNHLQPGDHLTDVTLKVAGRIHAKRASGGKLIFYDLRGEGVK
LQVMANSRNYKSEEEFVRINNKLRRGDIIGVEGNPGKTKKGELSIIPHEITLLSPCLHML
PHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRAKIITYIRSFLDELGFLEIETPMMNI
IPGGAVARPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP
EFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVIYHPDGPEGQACEIDFTPPFRR
ISMVEELEKTLGMKLPETRLFDTEETRKILDDICVAKAVECPAPRTTARLLDKLVGEFLE
VTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFE
EQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAM
KPEDKKENVATSETVENTAAGTSV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttgacacaagctgctctcaggcttgttagggggtccctgcgccaaaccgcctgggca
cagtgggggcagagggagccacgattttgtcaacttgcccctttcacgagtcacaaggac
aagacactttctgataaaaggagtgagctgaagagacgtttgaaagctgagaagaaagtg
gcagagaaggaggccaggcagaaagagctcagtgagaaacaacaggtccaggccacagct
gctgccaccaaccataccactgacaatggtgtgagtgccgaggaggagaccttggacccc
aaccaatactacaagatccgcagccaagcagttcagcaactaaaggtcagcggagaagac
ccctacccacacaagtttcacgtggatgtttcgcttactcattttatcaatgagtacaac
cacctgcagcctggagatcacctgacagatgtcaccttgaaggtagcaggtagaatccat
gccaaacgagcatccggggggaagctcatcttctatgaccttcgaggggaaggggtcaag
ttgcaagtcatggccaattccaggaattataaatcagaggaagaatttgttcgtatcaat
aacaagcttcgtcggggagacatcatcggcgtggaggggaatcctggaaaaaccaagaag
ggcgagctgagcatcatcccacacgagatcaccctactatctccatgcctgcacatgttg
ccacatcttcactttggcctcaaagataaggaaacccgctatcgccagaggtacttggat
ctcatcctgaatgacttcgtgaggcagaagttcatcatccgtgccaagatcatcacatat
atacgaagtttcctggacgaattgggcttccttgagattgaaacgcccatgatgaacatc
atcccaggaggagctgtggccaggcctttcatcacctatcacaatgagctggacatgaat
ttatacatgagaattgctccagaactctaccataagatgctggtggttggtggcattgac
cgggtttatgaaatcggacgtcaattccgaaacgaagggatcgacttgacacacaatcct
gagttcaccacctgtgaattctacatggcctatgctgactatcacgacctcatggagatc
acagagaagatggtttcagggatggtgaagcatataacgggcagttacaaggtcatctac
catccagatggcccagagggccaagcttgtgagattgacttcaccccacccttccggaga
atcagcatggtggaggagttggagaagaccctgggcatgaagctgcctgagaccaggctt
tttgacactgaagagacacgcaagattctggatgacatctgtgtggcaaaagctgtagag
tgtcctgcacctcgaaccacagccaggcttcttgataagctcgtgggggagttcctggaa
gtgacatgcatcaaccctactttcatctgtgaccacccgcagataatgagtcctttggcc
aaatggcatcgttccaaagaaggcctaacggagcgctttgagctattcgtcatgaagaag
gagatctgcaatgcctacacagagctgaacgaccccatgcggcaacggcagctctttgaa
gaacaggctaaggccaaggccgctggtgatgatgaggccatgttcatagatgaaaacttc
tgcacagccctggagtacggcctgcctcccactgccggctggggcatgggcattgaccgt
gtcaccatgtttctcacggactccaacaacatcaaggaagtacttctgtttcctgccatg
aaaccagaagacaaaaaggaaaacgtggcgacctctgagacagtggaaaacacagcagct
ggcacttctgtctag
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