Suncus etruscus (white-toothed pygmy shrew): 126027390
Help
Entry
126027390 CDS
T09902
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126027390
03015 mRNA surveillance pathway
126027390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126027390
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126027390
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126027390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PhaP_Bmeg
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126027390
NCBI-ProteinID:
XP_049642362
LinkDB
All DBs
Position
14:complement(67769472..67798328)
Genome browser
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKTKPDANGAVVKTNTNAEKTEEDEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPASRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSVRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCSNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAGELSKEGHQV
ALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMDILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggctctggcggtggacgagcaggaggcggcggccgagtcgttg
agcaatttgcaccttaaagaggagaagaccaagcccgatgccaatggtgctgtggttaag
accaatacgaatgcagagaagacagaggaagatgagaaagaggacagagccgcccagtca
ctactcaacaagctgatccgaagcaaccttgtggataacacaaaccaggtggaggtgctg
cagcgggaccccaactccccgctatactctgtgaagtcctttgaggagctgcgactaaaa
ccacagcttctccagggtgtttatgccatgggtttcaaccgcccctccaagattcaagag
aatgccttgcccctgatgcttgcagaacccccacagaacttaatagcccagtctcagtct
ggtactggcaaaactgctgcctttgtgttggccatgctcagccaagtcgaacctgcaagc
agataccctcagtgtctctgtctctccccgacctatgagcttgcccttcaaacaggaaaa
gtgattgagcagatgggcaaattttaccctgagctgaaactggcttacgctgttcgaggc
aataaattggagcgtggtcagaagatcagtgaacagatcgtcattggcaccccgggcact
gttctggattggtgctctaagctcaagttcattgaccccaagaagatcaaagtgtttgtc
ctggatgaggccgacgtgatgatcgcgacgcagggccaccaggaccagagcgtccgcatc
cagaggatgctgcccaggaactgccagatgttgctcttctctgccacctttgaggactca
gtgtggaagtttgcccagaaggtggtccccgaccccaacatcatcaagctgaagcgcgag
gaggagacgctggacaccatcaagcagtactacgtgctgtgcagcaaccgcgacgagaag
ttccaggccctttgtaacctctatggggccatcaccatcgcacaagccatgatcttctgt
catacacgcaaaacagcgagttggctggcaggcgagctctccaaggaaggccatcaggtg
gcgctgctgagcggggagatggtggtggagcagagggcagctgtgatcgagcgcttccgg
gagggcaaagagaaggtgctggtcaccaccaacgtgtgcgcccgcggcatcgatgtcgag
caggtgtctgtcgtcatcaactttgacctccccgtggacaaggacgggaaccctgacaac
gagacctacctgcaccgcatcgggcgcacgggccgctttggcaagaggggcctggcggtg
aacatggtggacagcaagcacagcatggacatcctgaacaggatccaggagcacttcaat
aagaagatcgaaaggttggacactgatgacttggacgagattgagaaaattgccaactga
DBGET
integrated database retrieval system
