Suncus etruscus (white-toothed pygmy shrew): 126027391
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Entry
126027391 CDS
T09902
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126027391
03015 mRNA surveillance pathway
126027391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126027391
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126027391
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126027391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PhaP_Bmeg
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126027391
NCBI-ProteinID:
XP_049642363
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Position
14:complement(67739440..67762257)
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AA seq
478 aa
AA seq
DB search
MATDSWAMAVDQQEAAVKSMSNLHINEEKVKPDSNGVVKPNATVEKTEEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYGMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEVAERYPQCLCLSPTYELALQTGKV
IEQMGKFHPDLRLAYAIRGNKLERGQKVSEQIIIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSVRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCSNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAGELSKEGHQVA
LLSGEMVVEQRAAVIERFRKGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMDILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccactgattcctgggccatggctgtagaccagcaggaagcggctgtcaagtcgatg
agcaatttgcacatcaacgaagaaaaagtcaaaccagattccaatggtgttgtcaaacct
aatgccactgtggagaaaacagaagaagaagagaaagaggacagagccgcccagtcacta
ctcaataagctgatccgaagcaacctcgtagataacacaaaccaagtggaggtgctgcag
cgggaccccaactccccactttactctgtgaagtcctttgaggagctgcgtctgaaaccg
cagcttctccagggtgtctatggcatgggcttcaaccggccatccaagattcaggagaat
gcactgcccatgatgcttgctgagcccccacagaacctcatcgcccagtctcagtcaggt
actgggaaaactgctgcctttgtgctggccatgctcagccgagtggaagtggcagaaaga
tacccacagtgtctctgcctctccccaacatacgaactggcacttcagaccggaaaagtg
attgagcagatgggcaagttccacccagacctaaggctggcttatgctattcgaggcaat
aaattggagcgtggccagaaggtcagtgagcagatcatcattggcaccccgggcactgtt
ctggactggtgctctaagctcaagttcattgaccccaagaagatcaaggtgtttgtcctg
gatgaggccgacgtgatgatcgcgactcagggccaccaggaccagagcgtgcgcatccag
aggatgctgcccaggaactgccagatgttgctcttctctgccacctttgaggactcagtg
tggaagtttgcccagaaggtggtccccgaccccaacatcatcaagctgaagcgcgaggag
gagacgctggacaccatcaagcagtactacgtgctgtgcagcaaccgcgacgagaagttc
caggccctttgtaacctctatggggccatcaccatcgcacaagccatgatcttctgtcat
acacgcaaaacagcgagttggttggcaggtgagctctccaaggaaggccaccaggtggcg
ctgctgagcggggagatggtggtggagcagagggcagctgtgatcgagcgcttccggaag
ggcaaagagaaggtgctggtcaccaccaacgtgtgcgcccgcggcatcgatgtcgagcag
gtgtctgtcgtcatcaactttgacctccccgtggacaaggacgggaaccccgacaacgag
acctacctgcaccgcatcgggcgcacgggccgctttggcaagaggggcctggcggtgaac
atggtggacagcaaacacagcatggacatcctgaacaggatccaggagcacttcaataag
aagatcgaaaggttggacactgatgatttggatgagattgagaaaattgccaactga
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