Suncus etruscus (white-toothed pygmy shrew): 126027478
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Entry
126027478 CDS
T09902
Symbol
PHAF1
Name
(RefSeq) LOW QUALITY PROTEIN: phagosome assembly factor 1
KO
K27411
phagosome assembly factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126027478 (PHAF1)
Membrane trafficking [BR:
setr04131
]
Autophagy
Other autophagy associated proteins
Others
126027478 (PHAF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
126027478
NCBI-ProteinID:
XP_049642451
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Position
14:61615120..61651765
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AA seq
426 aa
AA seq
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MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNL
TQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NSAEQLFHLNFRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGATVKRMYIYSGNSLQ
DTKAPVMPLSCFLGNVYAESVDVLRDGTGPSGLRLRLLAAGCGPGLLADAKMRVFERSVY
FGDSCQEVLSMLGSPHKVFYKSEDKVXEIXKIHSPSPHKQVPSKCNDYSLTTLTLGVDIL
FDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKIPLAIKKENADGQTETCTTYSKWDNIQE
LLGHPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPPRPGAYL
RPAELS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctcgaggtggtgcccgagcgctctctggggaacgagcaatgggagttcacg
ctcggaatgcctctggctcaggcagtagctattcttcagaagcactgtcgcatcatcaaa
aatgtccaggttctctacagtgaacagtctcctctaagccatgacctcatccttaacctg
actcaggacggaatcaaactactgtttgatgcttttaatcagagactgaaggtgattgaa
gtatatgacttgactaaagtaaagttaaaatattgtggcgtgcattttaactctcaggcc
attgctcccactattgagcagattgaccagtctttcggtgcaacccatcccggagtgtac
aactctgccgagcagctcttccacctcaatttcagaggattatctttctcttttcagtta
gactcttggacagaggctcctaaatatgagcccaattttgcccatggtctagcttccctc
cagataccccatggagcgactgtgaaacgaatgtacatctacagtggaaatagtctacag
gataccaaggctcctgtaatgcccctgagctgtttcctgggcaatgtatatgctgagagt
gtagatgttcttcgagatggaactggaccctcagggttacgacttcgcctacttgctgca
ggttgtggacctggcctgttagcagatgccaagatgcgggtatttgagcgttctgtgtat
ttcggtgactcctgccaagaagttcttagcatgcttggctctccccacaaagtcttctat
aagtcagaagacaaggtatgagaaatatgaaaaattcactctccttcccctcataagcaa
gtcccatccaagtgcaatgactactctttaacaactctcactcttggagtggacattctc
tttgatgctaatactcacaaagtgaagaagtttgttctacacaccaattaccctgggcat
tataattttaacatttatcatcgctgtgagttcaagatcccactagccataaagaaagaa
aatgcagatggtcagacagaaacatgcacaacctacagtaagtgggacaacatccaggag
ctcctgggccaccctgtggagaagcccgttgtcctgcacaggtcttcctctccgaataac
accaacccatttggctccacattttgctttggtcttcagcgtatgatttttgaggtcatg
cagaataatcacattgcctcggtaactctgtatggaccccccaggcctggtgcctatctg
agaccagcagagctctcctag
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