Suncus etruscus (white-toothed pygmy shrew): 126027490
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Entry
126027490 CDS
T09902
Name
(RefSeq) protocadherin gamma-A11-like
KO
K16495
protocadherin gamma subfamily A
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126027490
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Protocadherins
126027490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
RET_CLD1
DAAP1
TMEM154
Syndecan
Motif
Other DBs
NCBI-GeneID:
126027490
NCBI-ProteinID:
XP_049642456
LinkDB
All DBs
Position
14:complement(23814097..23823977)
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AA seq
937 aa
AA seq
DB search
MANRLLRLTCSGLLMCISMGMSQEAGARRIRYSVPEEVAKGVFVGNISKDLGLEPWDLEE
RRVRIVSEGKTQLFALNPRSGSLITGGRIDREELCETEASCLLNVEILVEDTLKIYGVEV
EIVDINDNAPRFQEEGIEIKISEQATPGSRFPLPIARDADVGVNSLLRYQLSQNSYFSLQ
MRGGTNGANNPELVLEGSLDREKKAIHHLVLTALDGGEPVRQGSVPIRVLVLDVNDHVPK
FTQSVYQVNIPENLNSGTRVLIVNATDPDEGINGEVEYSFPNMDRKASETFHLDSRSGEV
LIRGSLDFEKCRSYEMEIRGQDGGGLSTTVKMLVTVMDVNDNAPEITITSSTNSVLENSP
PGTVIALLNVQDRDSGKNGQVFCFIPNNLPFKLEKTYGNYYKLITNRELDREQVQSYNIT
LTATDQGSPPLSTEAHISLNVADDNDNPPTFAHPSYSTYIPENNPRGASFFSVTAFDKDS
KENAQITYALAEDTLRGAPLSSYVSINSDTGVLYALHSFDYEQFRDLQLWVTARDSGNPP
LSSNVSLSIFVLDQNDNAPEILYPTLPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN
AWLSYRLLKANEPGLFAVGLHTGEVRTARALLDRDALKQSLVVVVQDHGRPPLSATVTLT
VAVADSIPDVLADLSSISAPTNQDDSDLTLYLVVAVAVVSCVFLAFVIMLLALRLRRWHS
SRLLQASASGLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLIS
QESCEKSEPLLIAEDLATGLGKCDSTQHKSNSRCKGTSKHKGRHRKDNVHVCHEASYMVH
MAKNNPPWASISTFELDLGLNGQISYSIVASDLGPPDLAQWNGVHTSSHPQLGDACLSTN
VNLLVLVCDLNDNTPRVLHPTLRTYSSALFDMVNRAS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggctactgcgtctgacctgcagcggacttctgatgtgcatctccatgggg
atgtcgcaggaggctggggcccggcggatcaggtactcagtacccgaagaggtggccaaa
ggcgtcttcgtgggcaatatttccaaggatctggggctggagccctgggatttggaggag
cgccgagtgcgcattgtctctgaagggaagacgcagcttttcgctctgaatccgcgaagt
ggcagcttgatcacagggggcaggatagaccgggaggagctctgtgagacagaagcttct
tgtttgttgaatgtggaaatactagtggaggacactctgaagatttacggcgtggaggtg
gagatcgtggatattaatgacaatgccccccgcttccaggaggaggggatagagataaaa
atcagcgagcaagcaactcctggatccagatttccccttcctatcgcgagggatgcggat
gtgggcgtgaactccctcttgcgctaccagctcagccaaaatagttacttttccttgcaa
atgcgaggcggaaccaatggggccaataacccagaactcgtgctggaggggagcttggac
agggagaaaaaggctattcaccatctagtcctcacagccttagatggaggagagcccgtc
cgccagggctcggttcccatccgtgtgttggtcctcgatgtcaatgaccatgtgccaaag
tttacacagtctgtgtatcaagtgaacatccctgagaaccttaactctggaacccgggtt
ctcattgtcaatgcaactgatcccgatgagggaatcaatggagaagtagagtattcattc
cctaatatggaccgcaaggcatctgaaacattccatttggattcgaggtcaggcgaagtt
ctaatacggggatctctggattttgaaaaatgtagatcctatgaaatggaaatccgaggc
caagatggaggaggtctctccaccactgttaaaatgttggttacagtcatggatgtgaat
gataatgctccggaaatcactatcacttcttctactaactcagtgctggaaaattctcct
ccaggtacagtaattgcccttctaaatgtacaagatcgagactctgggaaaaatgggcaa
gtcttctgtttcattcctaacaatctaccttttaaattagaaaagacttatgggaattat
tataagttaataacaaatagagaactggacagggagcaggtccagagctataatataacg
ttgacagccacagatcagggaagtccacctttatctacagaagctcatatttcactgaac
gtggcagatgacaatgataatccacccacctttgctcacccctcttattctacctatatt
cctgaaaacaaccccagaggagcctccttcttctccgtgacggcatttgacaaggacagc
aaagagaatgcccagatcacttacgctctggccgaggataccttacgaggagcacccctg
tcctcctatgtctccatcaactcagacacaggcgtcctctatgcactgcactccttcgac
tatgaacagttccgtgacctgcagttgtgggtgacagcacgggacagtggcaacccgcca
ctcagcagcaatgtgtcattgagtatatttgtgctcgaccagaatgacaatgctcctgag
atcctataccccacactccctactgatggctccacaggggtggaactggctccccgctct
gcagagcctggctacctggtgaccaaagtggtggcagtggatagagactcgggccagaat
gcctggctgtcctaccgcctgctcaaagccaatgagccagggctgtttgccgtggggttg
cacaccggtgaggtgcgcactgcccgtgccctgctggacagagatgcgctcaagcagagc
ctggtggtggtggtccaggaccatgggcggccccctctctcagccactgttacactcaca
gtggccgttgctgacagcatccccgatgtcctggcagacctgagcagcatcagtgccccc
accaaccaagacgactcagacctcacgctctacctggtggtggcagtggccgtggtctcc
tgtgtcttcctggcctttgtcatcatgctgctggcactcaggctgaggcgatggcattca
tcgcgcctgctgcaggcttctgcaagtggattggctggtgtgcccgcctcgcactttgtg
ggcgtggacggggtcagggctttcctgcagacctactcgcatgaggtgtccctgactgcg
gactcgcgcaagagtcacctgatcttcccgcagcccaactatgcagacaccctcatcagc
caagagagctgtgaaaaaagcgagcctctcttgatagctgaagatttagctaccggttta
ggcaagtgtgattctactcagcataagagtaactctagatgtaagggaacgtcaaaacat
aagggaagacataggaaagataatgtgcatgtttgccacgaggcatcctacatggtccat
atggccaagaataatcctccatgggcctcaatcagtacttttgaacttgacctgggtctc
aacggccaaatctcctactccattgtggccagtgacctggggcctccagatcttgcacag
tggaatggtgttcacacctcgagccatccacaattaggtgacgcctgtctcagcaccaat
gtgaacctgctcgtgctggtgtgcgacctcaatgacaacactcccagggtgctacaccct
accctaaggacctacagctctgcactctttgacatggtgaaccgagcctcatag
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