Suncus etruscus (white-toothed pygmy shrew): 126027711
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Entry
126027711 CDS
T09902
Symbol
SEC24A
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126027711 (SEC24A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126027711 (SEC24A)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126027711 (SEC24A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
126027711
NCBI-ProteinID:
XP_049642669
LinkDB
All DBs
Position
14:complement(30798734..30864711)
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AA seq
1101 aa
AA seq
DB search
MSHPGVPAPGGAPPAGPQAQNGAALASGSLYANGPVQNALLSSQVPVSQGYSSQHPGSYP
HLMPAKTLNPVSGQSNYGGSQTFSPLNNYQGPGQTLNRPPVASNPATPSLHSGPVPRMPP
PTSQNPAATPMPSGSFLPGVNVPPSSNWQYNYPPPGSQTNHIPHASSQTTVSGNTNFQSH
QYVSSGEPLLQNNFMKPGSVPPLVNPPLLNTFQPGNPSGPPLAGGPSPVRAPPPQKSSQK
VVSQASFNSACNPEGITPNTNNGSMVVHNSYDEIEGGGFLATPQVPNKNPTMSRSVGYSY
PSLPPGYQNTAPPSTAGMPPSSMSYPSGPQPYSQTPLGANHLAASMSGLSLHPEGLRVIN
LLQERNMLPSTTLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLH
PFKDLVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRINDVPEEFMYNPLTR
VYGEPHKRPEVQNATIEFMAPSEYMLRPPQPPVYLFVLDVSHNAVETGYLNSVCQSLLNS
LDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNESK
ELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLISPTGGRMTVFQTQLPTLGVGALKPR
EEPNHKSSAKDIHLTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGS
VYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTD
LLSLPNVNPDAGYAVQMSVEENLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVASLN
EIFLGADVQAISGLLANMAVDRSVTTSLSDARDALVNAVIDSLSAFRTSVLSSQQPGLMV
PFSLRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVHFMLSTHPSLYRVDNL
SDEGALNIKDRTVPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCGQNFLHQVLGVE
NYALIPHNMTDLPELDTPESARIITFISWLREQRPFYPILYVIRDESPMKASFLQNMVED
RTESALSYYEFLLHIQQQVNK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcctggggtcccggccccgggcggcgcgccccccgccggcccgcaggcccag
aacggggccgccttggcctcggggtctctctacgccaacggtcctgttcaaaatgcactg
ttatcttcacaagtgccagtgagccaaggatatagttctcagcatccaggatcctaccct
catctaatgccagcaaagactttgaatccagtttctggacagtctaactatggtggttct
cagactttttctccattaaataattatcagggacctggacagactcttaatagaccacct
gtggcttccaatccagcgacaccctcactccatagtggtcctgttcctcgaatgccacca
ccaacttctcagaatccagctgctacaccaatgccttctggtagctttctccctggagtg
aatgtaccaccatcttcgaattggcaatataactatccacccccaggatcacagacaaat
catattcctcatgcatcatcccaaacaacagtgtctgggaatacaaactttcaaagtcat
cagtatgtttcttctggagaacctttgcttcaaaacaacttcatgaaaccaggttctgta
cctcctttagtgaatccacctctactcaacacttttcaaccaggaaatccctctgggccc
cctctagctggaggaccatctccagtgagagcgcctcctcctcaaaaatcatcacaaaag
gttgtgtcccaagcatcatttaattcagcttgcaatccagaaggtattacaccaaatacc
aataatggatctatggtggttcacaatagttatgatgaaattgaaggcggtggattcttg
gcaacaccacaggttcctaataagaatcccacaatgagccgaagtgttggatattcatat
ccctccttaccacctggttatcagaacacagcaccacctagtacagctggaatgccaccc
tcttccatgagctatccaagtgggccacaaccctattcacagactcccttaggtgctaat
catttagctgcaagcatgagtggattaagtctgcatccagagggtttaagagtcatcaat
ctacttcaagaaagaaacatgcttccatcaacaactttgaagcctccagttccaaatttg
catgaagatatccagaaacttaactgtaatccagagttatttcgatgcacgctgactagc
attcctcagactcaggccttactgaataaagccaaacttcctttgggacttctgcttcat
ccttttaaagacctagtgcaattgcctgtggttacctccagtacaattgtgagatgccgt
tcctgcaggacttacatcaatccttttgtcagttttcttgatcaaaggagatggaagtgt
aacttatgctaccgaatcaatgatgttcctgaagaattcatgtacaaccctttgaccaga
gtctatggagaacctcataaaagacctgaagttcagaatgctactattgagtttatggct
ccttcagaatatatgttaagaccgcctcagcctccagtttacctcttcgtgcttgatgtg
tcccataatgcagttgaaactggatatttgaattcagtttgccagagtttattgaacagt
ctggatttgctccctgggaacactaggacaaaaattggcttcataacttttgatagtaca
attcatttctacagtcttcaggaaggtctttctcaacctcagatgctcatagtttctgat
attgaagatgttttcatacctatgccagagaacttactagtaaatttaaacgagagtaaa
gagcttgtgcaagatttactgaaaactttgccgcaaatgttcaccaagaccctggagacc
cagagtgccttgggtcctgcactgcaggctgcctttaaactgatatccccaacgggtggt
cgaatgactgtctttcaaacacaacttcccactcttggcgtaggagccctgaagccacgt
gaagaaccgaaccacaaatcatctgctaaggatatccacttaactccatccactgacttc
tataagaaattagctttggactgttcaggtcaacaggtagctgttgacttattccttctc
agtggacagtattctgatttggcttctttgggttgtatttctcggtattcagcaggtagc
gtctattactatccctcttaccaccatcagcacaacccagtccaagtgcagaaattgcag
aaggaactacaaagatacctcactcgtaagattggctttgaagcagtcatgaggattcgg
tgcaccaaaggtctttccattcataccttccatgggaacttctttgttaggtcaacagat
ttactgtctttacccaatgtaaatccagatgctgggtatgcagtccagatgtcagtggaa
gagaatctcactgacactcagttggtttcctttcagtcagctctcctatatacatccagc
aaaggtgaaaggagaattcgtgttcacactttgtgtttgccagtagttgcatctctgaat
gaaatctttcttggagctgatgttcaagcgatttcaggattgttggccaatatggctgtg
gacagatctgtgacaaccagtctgagtgatgctcgagatgccctggtgaatgctgtcata
gactctctttcggcttttcgcacttcagtcctaagtagccagcagcctggactcatggtt
cctttttctctgagactttttccactctttgtgttggcactccttaaacagaaatcgttc
cagactgggacaaatgcacgactagatgagcgcatttttgcaatgtgtcaagtgaaaaac
cagcctttggtccactttatgctctcaactcatcccagtttgtatagagttgacaatctc
tcagatgagggagcactcaatatcaaagatcgcactgtacctcagccgcctatccttcag
ctctcagtggagaagctcagcagagatggagctttcctcatggatgcaggctctgtattg
atgctttgggttggaaaaaattgtggacagaattttctccaccaggttctaggagtggaa
aactatgcattaattccacacaatatgacagatcttccagaacttgatacaccagaatct
gccagaataataacgtttatctcttggcttcgagaacagagaccattttacccaatactt
tatgtgatacgggatgagagtccaatgaaagcaagcttccttcaaaacatggtagaagac
agaacagaatctgcattatcatattatgaattccttttgcatatacaacaacaagtaaat
aagtga
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