Suncus etruscus (white-toothed pygmy shrew): 126027833
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Entry
126027833 CDS
T09902
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126027833 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126027833 (SEC24D)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126027833 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
126027833
NCBI-ProteinID:
XP_049642805
LinkDB
All DBs
Position
14:complement(14219797..14305634)
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AA seq
1031 aa
AA seq
DB search
MSQQGYVAAAPYSQAQPGIGLSSPHYGHYGEPSHAASPPGTMKPAGPMGAIGPGGMLPPG
PPPPGPQQFGQNGAHASNLPPQRSLGPPPATSMASSYTQYLPSTQPSYPSPASTSSVTQL
GNQLGAMHINSFGPGLAPPGQGPPPGSQSGTAFQGPPRPPQPSIMQPGSQVLPPPPSAVN
GPGAMPMPPPAHRQDGLTGPAPPGAQYQPPPLPGQGAGYPPQQGNFGPPMPGAQLSYPGG
FPGGPAQMAGPPQPPKKLDPDSIPSPIQVIENDRVTRGAQVYATNTRGQVPPLVTTDCVI
QDQGNASPRYIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATVPSNETPLFLVNHGDSGPV
RCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHMGRRLDHYEKPELSLGS
YEYIATLDYCRKNKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTVLERLPKEEQEENS
AVRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQAVIHNLLD
QIPEIFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKL
VNTDKEKTLFQPQTNVYESLAKDCVATGCCVTLFLFPSQYSDVASLGLVPQLTGGTLYKY
NNFQIHLDSQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGIFMNNTTDVEMAAI
DCDKAVTVEFKHDDKLGEDSGALIQCAVLYTTIGGQRRLRIHNLSLNCSSQLTDLYKSCE
TDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKV
LPVYMNSLLKNCVLLSRQEISMDERAYQRQLVMTMDVADSQLFFYPQLLPIHTVDVKSTA
LPSAVRCSESRLSEEGMFLLATGQNMFLWVGVSCPPELIQGIFNVPSFAHVNTNMTTLPE
VGNPYSQSLRIIMSIIQQKKPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVDFLC
CVHKEICQLLN
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaggttatgtggctgcagccccctattctcaggcccaacctggaatcggc
ctatcgtcaccacattatgggcactatggagagccatctcatgcagcttctccaccagga
acaatgaagccagcaggacctatgggagctattggtcctggggggatgttgcctcctggc
cctccacctcctggaccccaacagtttggccagaatggagcccatgcatcaaatcttcct
ccccagagatctctaggtcctccacctgccaccagtatggcgtcttcctacactcagtac
ctgccctccacacagccgtcttatccgagtcctgcatccacgtcatctgtcacccagctc
ggcaatcagctcggagccatgcacatcaacagctttggtccaggacttgctccccctggt
caggggccaccaccaggttctcagtcaggaacagcattccagggcccaccgcgaccaccc
cagccatccattatgcagcctggatctcaggttcttccaccaccaccatctgccgtaaat
ggccctggggccatgcccatgcccccgcctgcacacaggcaggatgggctcacagggccg
gctcctccaggggcacagtaccagcctccacctcttccaggacagggtgcaggatatcct
ccacagcagggtaactttggcccaccgatgcctggggcgcaactttcctatccaggtggc
ttccccggggggcctgcacaaatggctggtccaccacagccccccaagaaactggatcct
gactcaattcccagccctatccaggtgatcgagaatgacagagtcaccagaggggcacaa
gtatatgccaccaacaccagagggcaggtgcctcccttggtcaccacagattgtgtgatc
caagaccaaggcaatgccagtccccggtacatccgttgtacaacgtactgcttcccctgc
acgtcggatatggccaagcaagctcagattccattggctgctgtcattaagccctttgcc
acggtgccctccaatgagactccacttttcttggtaaatcatggtgatagtggtccggtg
agatgcaacaggtgcaaagcctacatgtgcccctttatgcagttcatcgagggtggaagg
cggtatcagtgtggattctgcaattgcgtgaatgatgttccgccattctattttcaacat
ctggaccacatgggaagaagactggaccactatgagaagccagagctatctctaggatct
tatgaatacatcgcaactttggattactgcagaaagaacaagcctcccaacccaccagcc
ttcatcttcatgattgatgtctcctatagcaacatcaagaacggcctcgtaaagctcata
tgtgaggaactgaagacagtactggaaagacttccaaaggaggagcaagaggagaattca
gcagtccgtgttggttttatcacatataacaaagttctccatttctttaatgtgaagagt
aatttagcacagccccagatgatggtggtaactgatgttggagaagtctttgtgcctttg
ttggacggtttccttgtcaactatcaagagtctcaggctgtgattcataatttattggac
cagattccagaaatatttgcagactcgaatgaaaatgaaactgtctttgcgcctgttatc
caggctggtatggaagcactaaaggcagcagattgtcctgggaaactgttcatctttcat
tcctccttgccaactgcagaggcaccaggaaagctcaagaacagagatgacaaaaaactg
gtcaatacagataaagagaagacacttttccagccgcagacaaatgtgtatgagtccctg
gccaaggactgcgtggccacgggctgctgtgtgacactcttcctctttcccagtcagtac
tcagatgtggcctctttggggctcgttcctcagctcaccggaggaaccttgtacaaatac
aacaacttccagatccatttggatagtcaacagttcttgaatgacctcagaaatgatata
gaaaagaaaataggatttgatgctataatgagagttcgtaccagcacaggtttcagagcc
actgacttttttgggggaatattcatgaacaacaccactgatgtagaaatggctgccatt
gactgtgacaaggcagtaactgtggagttcaagcatgatgacaaacttggtgaagacagt
ggagctttaatccagtgtgctgttctctacaccaccatcggtggccagcggagacttcga
attcacaatctcagcctgaactgcagctctcagttgacagatctctataagagctgtgag
acagatgccctcatcaacttcttcgccaagtcagcttttaaagcagttctgcaccagccc
ttgaaggtcatccgggagatcctagttaaccaaactgcccatatgttggcgtgttaccgg
aagaattgtgcaagtccatctgcagctagccagcttattttaccagattccatgaaagtg
ttaccagtttacatgaatagcttgttaaaaaactgtgtgctgcttagccggcaagagatc
tcaatggatgaacgggcataccagaggcagctggtcatgactatggatgtggctgactct
cagctcttcttctaccctcaacttctgcctatacataccgtagatgtcaagagtacagca
ttgccctctgctgtgcgctgctctgagtctcgtctttcagaagaaggaatgttcctactg
gctactggtcaaaacatgttcctgtgggtgggagtcagctgtccaccagaactcatacaa
ggaatatttaatgtgccgtcttttgcacatgtaaacacaaacatgacaacactgcctgaa
gtgggaaacccatattctcagtcactgagaattataatgagtattatccaacagaagaag
ccatattcaatgaagctcacaattgtcaagcagagagagcagccagagatggttttccga
cagttcctggtggaagacaaaggcttgtatgggggatcatcttatgtggatttcctctgc
tgcgtacacaaggagatctgtcagctgctgaattag
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