Suncus etruscus (white-toothed pygmy shrew): 126027835
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Entry
126027835 CDS
T09902
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B
KO
K14007
protein transport protein SEC24
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126027835 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126027835 (SEC24B)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126027835 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
126027835
NCBI-ProteinID:
XP_049642806
LinkDB
All DBs
Position
14:6843251..6898459
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AA seq
1216 aa
AA seq
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MSGPAARACSPAAPAGPARTSPRSDPAQTQVPPGLSPPPPLPPYGVPVGYHHPGPEKMAS
LPVDSQHGVGYYSGLYMGPAHNMVAASPAYSQPGAPQGYSRGPLMPTSSAPHLPAAAPQP
YCTSVNHLSGPAVPSANSSAASQGPAATSDHYAMAPGASPALYSGVPQASLPAGDPYGPP
VFTSPCAPTSRTPRDLPSATPGPAPGHPAPARHAPQQQSPPGTTPHSWTTSSPAVAHDSL
IRNHTSSLGPARSSPASTDSLSCSSSTNTQPPNASPSVPTVFSGVSSSCAPAVSAPARMS
EVAQQKGIGLQYGDYVSNRASSTATPLSSTSDDEEEEEEDEEAGIASSSTTSSASPVPNS
YDALEGGNYPELLSSPASSPVPDPNPDPEPLLDTAPMTSQPSKMAKPFGYVYPTLQPGYQ
NAQAPMGPGIRPSNPAYPSFQYAQQYPGLTQLSSGLGGLSLHNSPPPESLRPVNLTQERD
ILPSTPIWAPVPNLNLELKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLT
QLPVITSNTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPQ
KRPEVQNATVEFIASSDYMLRPPQPAVYLFVLDVSHNAVDAGYLTVLCQSLLENLDKLPG
DSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDLEDVFLPTPDSLLVNLCESKELIKDL
LNVLPTMFTNTRETHSALGPALQAACKLMSATGGRVSVFQTQLPSLGAGLLHSREDPNQR
SSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCLYYYP
SFHCTHNPPQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLA
NINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSRGERRIRVHTLCVPVVSSLADVYAG
VDVQASVCLLANMAVDRSVSSSLSDARDALVNAVVDSLAAYGSTTSHLPRTTLMAPGSLK
LFPLYILALLKQKAFRTGTSTRLDDRVYAMCQIKCQPLVHLMKMIHPNLYRIDRLTDEGA
VHVNDRVVPQPPLQKLSAERLSREGAFLMDCGSAFYIWIGKGCDSHFIQDVLGCTNFASI
PQNMTDLPELDTLPSERARSFLAWLRENRPLSPILHVVKDESPAKTEIFQHLIEDRTEAA
FSYHEFLLHVQQQICK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccggccgcccgcgcctgcagccccgccgcgcccgccggcccggcccggacg
tcccctcgcagcgatccagcccagacacaggttccgcccgggttaagcccccctccacct
ctgccaccctacggtgttcctgtggggtaccaccatccaggccccgagaaaatggcctcg
ttgccagtggacagtcagcacggtgttggctactactctggcctctacatgggacccgca
cacaacatggtggctgccagccctgcatattcccagccgggggctcctcaggggtacagc
cgggggcccctcatgcccacctcgtcggccccccacctacctgcggctgccccccagccc
tactgcacgtcggtgaatcacttgagtggcccagccgtgccctctgccaactcctcagct
gcttctcagggacctgctgccacctccgaccactatgcgatggccccgggggcctctccg
gccctgtattccggggtgccgcaggcctctctacccgctggggatccgtatgggccccca
gtgtttacctcaccatgtgcgcccacaagcaggactcccagagacttgccctcggccact
ccgggcccagcgcctggccatccagccccggcccggcatgctccccagcagcagagtccc
ccaggaactaccccgcactcgtggacaacgtccagccccgctgtggcccacgacagtctc
atccgcaaccacacgagctccctgggcccggcccgcagcagcccagccagtaccgattct
ttatcctgctccagtagcacaaatacacagcccccaaatgccagcccttcggtgcccact
gtgttctcaggggtgtcctcctcatgcgcacctgcggtcagtgccccggccagaatgtcg
gaggtagcacagcagaaaggaattggcttgcagtatggtgactatgttagtaaccgcgct
agctccacagcgacccccttgtcatcaacttccgatgatgaggaagaggaggaggaggat
gaggaagcaggaatcgccagctcatccaccacgagcagcgcctctcctgtgcccaacagc
tacgatgccctagaaggaggcaactacccagaattgctttcttccccagccagcagccct
gttcccgaccctaacccagacccggaaccgctgctggacacagcccccatgacttcccag
ccttccaaaatggccaagcctttcgggtacgtgtacccgactctgcagcctggctatcag
aatgcccaagcgcccatgggccctggaattcggcccagcaaccctgcgtaccccagcttc
cagtatgcccagcagtatccgggcctgacccagctctcctctggcctgggtggtttgagc
ttgcacaattcccccccaccggaaagcctgcggcctgtgaacctcacccaggagagggac
atcttgcccagcacgcccatctgggctcctgtgcccaacttgaatctcgagctgaagaaa
ttaaactgtagccccgattcatttcgatgcactttgacaaatattccacagacccaggct
ttactgaataaagcgaagcttccactaggactgttgttacatcccttcagagacttaacg
caattacctgtgataacgtccaataccattgtgaggtgtcgctcttgtcgaacatacatc
aacccttttgtgtccttcatcgaccagcgaaggtggaaatgcaatttgtgctatagggtc
aacgacgtgcctgaagaattcatgtataaccccctcacccgatcttacggagagcctcag
aaacgcccagaagttcagaatgcaacagtggagttcattgcttcttctgattacatgctc
cgtcctcctcagcctgccgtttacttgtttgttttagatgtttctcacaatgcggtggac
gctggatatttaactgttttgtgccagtcgctattagaaaatctagacaagcttcccggg
gactcaaggacccggataggatttatgacgtttgatagtactattcacttttacaatcta
caggaaggactgtcacagccacaaatgttgatcgtctctgacttagaagatgtttttcta
cctactccagatagcttactcgtgaatctttgtgaaagcaaagagcttataaaggactta
ttaaacgtgttaccgaccatgttcactaacacacgagagacacacagcgcactgggtcct
gcactccaggccgcctgtaagctgatgtctgccacaggtggccgcgtgtccgtgttccag
acccagctgccctcgctgggggcgggcctgctgcattcccgggaggaccctaaccagcgg
tccagtaccaaggtggttcaacatctgggtcctgcgactgatttttacaagaaactcgct
ctcgattgctcggggcagcagacagcagtggatctgttccttttaagttcacagtattca
gatctggcttctctagcctgcatgtccaagtattctgcagggtgtctctactattaccct
tctttccactgcactcacaatcctccacaagcggaaaagttacagaaagacctaaagcga
tatctcactaggaaaattggatttgaagctgtcatgagaataaggtgcacaaaaggcctt
tccatgcacactttccatggaaacttctttgtccgttctaccgacttgttatcccttgcc
aacatcaaccctgatgctgggtttgcagtccagctgtcaatcgaagagagcctgacagat
acttccctggtgtgtttccagactgccttgttgtacacatcaagcagaggagagcgaaga
attcgtgtgcacaccctgtgtgtgcctgtggtgagctccctggcagatgtgtatgctggg
gtggatgtacaagcctctgtctgcctgctggcaaatatggctgtggaccgctcagtgtcg
tcgagcctgtcagatgccagagatgccttggtgaacgccgtggtggactcgctggcagcc
tatggtagcaccacctcgcacctgcctcgcacaaccctcatggcccctggctccctcaaa
ctcttcccactctacattctggccctcctcaaacagaaagcatttaggactggtacgagc
acacgtctggatgatcgagtgtatgccatgtgtcagatcaagtgccagcctctggtccat
ctcatgaagatgattcaccccaatctgtacaggatagacagactgactgacgagggcgca
gtgcacgtcaatgacagggtcgtgcctcagccacctcttcaaaaactgtctgcagagaga
ctgtcaagagaaggggccttcctcatggactgtggctctgcgttctacatttggattggg
aaaggctgtgactctcacttcatccaggatgtgctcggctgtacaaactttgcgtctatc
ccacagaacatgacagatctcccggagctggatacactgccgtccgagagggctaggtcg
ttcctagcttggctcagagagaacagacccctcagcccgatcctgcacgtggttaaagat
gagagccccgccaaaacagaaatcttccagcatctgattgaagaccggaccgaagctgcc
ttctcttaccatgagtttctgctgcatgttcagcagcagatttgcaagtga
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