Suncus etruscus (white-toothed pygmy shrew): 126027849
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Entry
126027849 CDS
T09902
Name
(RefSeq) protocadherin beta-17-like
KO
K16494
protocadherin beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126027849
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Protocadherins
126027849
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
126027849
NCBI-ProteinID:
XP_049642841
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Position
14:complement(24123084..24136161)
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AA seq
807 aa
AA seq
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MEILLLKTRQKRQVAAISTLLLLLLLLLWGVGGETLKYSILEERNSGSLVANLAKDLGLS
LGELNARGTRIISKGNKQLLQFEQKSGNLLLKERLDREELCGDTDPCLLHFQVLLENPVQ
FVQGEIYLQDINDHAPEFLDKEIILKISEISHPGTIFPLKIAQDLDVGSNTVQNYTISTN
SYFHLSTQSHRDGRKYPELVLDKVMDREQEPELRLTLTALDGGSPPRTGTSLVLIMVLDI
NDNAPEFAQLLYEVQVPENSPIGSLVITVSARDLDAGTHGELSYSFFQASKQIMQAFEIN
TVMGEIRLKKMLDFEGIQSYQMEIEASDGGGLSGKCTVAIEVIDVNDNAPELTLSLLNSN
IPENSPDTVVAIFGISDPDSGDNGKVTCSIQDRLPFLLKRTIENFYTLVTEGALDREQQE
EYNITITATDMGTPRLATQHTIRVQVSDVNDNAPAFSQPSYTLLVGENNSPALHIGSVSA
TDADAGSNAQLTYSLLPGPEPWPAQLPLASLVSINADNGQLFALRSLDFEAVRAFEFSVR
AQDRGSPALSGQARVRVQVLDRNDNAPFVLYPLQNASAACSELVPRAAEAGYLVSKVVAV
DGDAGQNAWLSFQLLKATEPGLFSVWAHNGEVRTARPLSERDAPKHRLLVLVRDNGEPPL
SASVTLHVLLVDGFSQPFLPLPDAAPGAAPDDRLTVYLVVALACVSSLFLFSVLAFVAVR
LCRRAGPAAGGGYPYPGLPDAPFPGQLLDASGAGTLSHSYRYEVCLAGGAGTNDFKFLKP
ILPMFRPQATGDVLEENPTFPNSYGTS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggagatcctgctactcaaaacacgtcagaaaaggcaagtagctgccattagtactctg
ttattattattattattattattgtggggagtgggaggtgagacccttaagtattccatt
ttagaagagaggaacagcggttctttagtggccaatttagcaaaagatctgggactgagt
ttaggtgagctgaatgcacggggcacccggattatttccaagggaaataagcagcttctg
cagtttgagcagaagagtgggaatttgctcctaaaagaaagactggaccgggaagagctg
tgtggtgacacagatccatgtctactgcatttccaagtgttgctggaaaatccggtacaa
tttgttcaaggtgaaatctatctccaagacataaatgaccatgctccagaattcttggac
aaggaaatcatcttgaaaatctcagaaatcagtcacccagggactatatttcctctaaaa
atagctcaagatttagatgtgggtagtaacacagttcagaactatacaattagcaccaac
tcctattttcacctctccacccaaagtcacagagatggcaggaaatatccggaactggtt
ctggacaaagtaatggaccgggaacaagagccagaactcagattaactctcacagccctg
gatggtgggtcaccgcctaggactgggacttccctggttctcattatggttcttgacata
aacgacaatgccccagaatttgcacagcttctctatgaggttcaggtccccgagaacagt
cctatagggtcccttgtcattactgtctctgctagggatttggatgctgggacccatggg
gaactctcctactcatttttccaggcctcgaagcaaatcatgcaggcttttgaaataaac
acagtcatgggagaaattcgattaaagaaaatgttggattttgagggaatccaatcttat
caaatggaaattgaggcctcagatggtggaggtctttctggaaaatgcacggttgccata
gaagtgatagatgtaaatgacaatgcaccagaactgaccttgtcattactcaatagtaat
ataccagaaaattctccagacactgtggttgctattttcggaatttccgacccagattct
ggggacaatgggaaagtgacatgttccattcaagaccgtcttcccttccttttgaaacga
accatagaaaacttctataccttggtcactgaaggagcactggaccgagaacagcaggag
gagtacaacatcaccatcaccgcgacagacatgggcacccccaggctggcaacgcagcac
accatcagggtgcaggtgtccgacgtgaacgacaacgcccccgccttcagccagccctcc
tacaccctgctggtgggcgagaacaacagccccgcgctgcacatcggcagcgtgagcgcc
acggacgcggacgcgggcagcaacgcgcagctgacctactcgctgctgccgggccccgag
ccttggcccgcgcagctgccgctcgcctcgctggtgtccatcaacgcggacaacgggcag
ctgttcgcgctgcgctcgctggacttcgaggcggtgcgcgccttcgagttctccgtgcgc
gcgcaggaccgcggctcgcccgcgctgagcggccaggcgcgggtgcgcgtgcaggtgctg
gaccgcaacgacaacgcgcccttcgtgctgtacccgctgcagaacgcgtcggcggcgtgc
agcgagctggtgcccagggcggccgaggcgggctacctggtgagcaaggtggtggcggtg
gacggcgacgcgggccagaacgcctggctgtccttccagctgctcaaggccacggagccc
gggctcttcagcgtgtgggcgcacaatggcgaggtgcgcacggcgaggccgctcagcgag
cgcgacgcgcccaagcacaggctgctggtgctggtcagggacaatggcgagccgccgctg
tcggccagcgtcacgctgcacgtgctgctggtggacggcttctcgcagcccttcctgccg
ctgcccgacgcggcgcccggcgcggcgcccgacgaccgcctcaccgtctacctggtggtg
gccttggcgtgcgtgtcgtcgctcttcctcttctcggtgctggccttcgtggctgtgcgc
ctgtgccggcgggccgggccggcggcggggggcggctacccctacccgggtctccccgac
gccccctttccaggacagctgctggacgccagcggcgcggggaccctgtcccacagctac
cggtatgaggtgtgcctggcggggggcgctggcaccaatgacttcaagttcctcaagccc
attctgcccatgtttcggccacaagccactggcgatgtcctagaggaaaaccccaccttt
ccgaatagttatgggactagttag
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