Suncus etruscus (white-toothed pygmy shrew): 126027850
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Entry
126027850 CDS
T09902
Name
(RefSeq) protocadherin beta-16-like isoform X1
KO
K16494
protocadherin beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126027850
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Protocadherins
126027850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DnaJ-like_C11_C
Motif
Other DBs
NCBI-GeneID:
126027850
NCBI-ProteinID:
XP_049642842
LinkDB
All DBs
Position
14:complement(24062593..24087021)
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AA seq
806 aa
AA seq
DB search
MAIGWMLNQRQRQVLAFIVLLSMLGVDSELGPYSVVEETERGSVVANLGKDLGLELTEMA
IRGTRIISQGSKEHLQFKVQTGNLLIKEELDREELCGSTEPCILQFQVLMEKPLEIFQAD
LRVMDINDNSPIFTEREMILKIPENSPPGITFSLNTAVDLDVGSNNIQKYEISPNSHFRV
LTQNRSDGTKYPELVLENELDREDEPEISLTLKALDGGNPHRSGTSKVLIEVVDNNDNSP
EFEQQLYRVHIPENSSIGSLVTTVSASDLDSGVNGEITYTLFQPSEDISKTLKLNPMTGE
IRLRKQVDFEIIQYYEVDIKAIDGGGLSGKCTLLLRVLDVNDNPPQVTMSAVTSPIPENS
PEMVVAVFSVLDPDSGDNGKTVSSIQDDLPFLLKPPVKNIFTLVTQRELDREERSEYNIT
ITVTDLGIPRLATQHTIRVQVSDVNDNAPAFSQPSYTLLVGENNSPALHIGSVSATDADA
GSNAQLTYSLLPGPEPWPPQLPLASLVSINADNGQLFALRSLDFEAVRAFEFSVRAQDRG
SPALSGQARVRVQVLDRNDNAPFVLYPLQNASAACSELVPRAAEAGYLVSKVVAVDGDAG
QNAWLSFQLLKATEPGLFSVWAHNGEVRTARPLSERDAPKHRLLVLVRDNGEPPLSASVT
LHVLLVDGFSQPFLPLPDAAPGAAPDDHLTVYLVVALACVSSLFLFSVLAFVAVRLCRRA
GHAAGAGYPYPGLPDGPFPGQLLDASGAGTLSHSYRYEVCLAGGAGTNDFKFLKPILPIF
PPQDTNTGEVVEQNPSFRNSLGLNIQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgattggatggatgctcaaccagagacaaaggcaagtccttgctttcattgttttg
ctcagcatgttgggggtggactctgaattagggccttattcagtggtggaagaaacggag
agaggttctgtggtggcaaatctaggaaaagatctgggactggagttgacagagatggcc
attcgtgggactcgaattatttctcaagggtcgaaagagcatttgcaattcaaggttcag
actgggaatttgctcataaaggaggaactggaccgagaagagctgtgtggttcaacagag
ccttgcatactacaatttcaggtattaatggaaaaaccactagagatctttcaggctgac
ctgagggtgatggacataaatgacaattctcccatattcactgaaagagaaatgatttta
aaaattccggagaatagtcctccaggaattacattttctctgaatactgctgttgatttg
gatgtaggaagcaacaatattcagaaatatgaaatcagtcccaactcccattttcgggtt
ctaacccaaaatcgcagtgatggcacaaaataccctgagcttgtgttagaaaatgagcta
gatcgggaggatgagcctgaaatctcattaaccctgaaggcgctggacggtggcaatcca
catcgctcagggacatccaaggtgctcattgaagtggtggacaacaatgacaattcccca
gaatttgagcagcagctctacagggtgcatattcctgagaacagctccataggatctctg
gttaccacagtgtctgctagtgatttagatagtggagttaatggagaaatcacatataca
ctctttcagccttcagaggacattagcaaaaccttgaaattaaaccctatgacaggtgaa
attcgactgagaaaacaagtagattttgaaataattcagtattatgaagttgatatcaag
gcaatcgatggaggaggtctttctgggaaatgcactcttctactgagggttctggatgtg
aatgataaccccccacaagtgaccatgtcagcagtcaccagtcccattccagagaactca
cctgagatggtagttgcagttttcagtgtattagatcctgactctggtgacaatgggaag
actgtttcctcaattcaggatgaccttccttttcttctaaaacctccagtaaagaatatt
ttcaccttagtaacccagagagagcttgacagagaagaaagatcagagtacaatatcacc
atcacggtgacagacctgggcatccccaggctggcaacgcagcacaccatcagggtgcag
gtgtccgacgtgaacgacaacgcccccgccttcagccagccctcctacaccctgctggtg
ggcgagaacaacagccccgcgctgcacatcggcagcgtgagcgccacggacgcggacgcg
ggcagcaacgcgcagctgacctactcgctgctgccgggccccgagccttggcccccgcag
ctgccgctcgcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctgcgc
tcgctggacttcgaggcggtgcgcgccttcgagttctccgtgcgcgcgcaggaccgcggc
tcgcccgcgctgagcggccaggcgcgggtgcgcgtgcaggtgctggaccgcaacgacaac
gcgcccttcgtgctgtacccgctgcagaacgcgtcggcggcgtgcagcgagctggtgccc
agggcggccgaggcgggctacctggtgagcaaggtggtggcggtggacggcgacgcgggc
cagaacgcctggctgtccttccagctgctcaaggccacggagcccgggctcttcagcgtg
tgggcgcacaatggcgaggtgcgcacggcgcggccgctcagcgagcgcgacgcgcccaag
cacaggctgctggtgctggtcagggacaatggcgagccgccgctgtcggccagcgtcacg
ctgcacgtgctgctggtggacggcttctcgcagcccttcctgccgctgcccgacgcggcg
cccggcgcggcgcccgacgaccacctcaccgtctacctggtggtggccttggcgtgcgtg
tcgtcgctcttcctcttctctgtgctggccttcgtggccgtgcgcctgtgccggcgggca
ggccatgcggcgggggccggctacccctacccgggtctgcccgacgggccctttccggga
cagctgctggacgccagcggtgcggggaccctgtcccacagctaccggtatgaggtgtgc
ctggctgggggcgctggcaccaatgacttcaagttccttaagcccattctgcccatcttt
ccaccccaggacactaacactggcgaagttgtagagcaaaatccttcattccgcaatagt
ttgggattaaatattcagtga
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