Suncus etruscus (white-toothed pygmy shrew): 126027964
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Entry
126027964 CDS
T09902
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
126027964 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
126027964
NCBI-ProteinID:
XP_049642947
LinkDB
All DBs
Position
14:complement(93403770..93453797)
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AA seq
2192 aa
AA seq
DB search
MTHSPASSEDEDPHSVSECPEGGSESESSPDGPGRGLRGTRGRGHSGAPPTSLASIRGLQ
GRSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYG
LFQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKT
GLKKFLEYVQLGTSDKVARLLNKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGA
HIDFRARDGMTALHKAACARHCPALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCE
LLLYNRAQLGVADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYN
KETCARVLLYRGASKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAA
RRRGPPGAGLTVPPTLLRANSDTSMALPDWMVFAAPGGSSSGTPGPSSGPLGQSQPSAVG
TKLNTGTLRSASSPRGPRARSPSRGRQPEDAKKQPRGRPSSSGTPREGPAGGTSSSGGPG
GSLGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKG
RVGWFPSECLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLKDGIGPGSDYI
IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRM
GDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAAHKKAPQQAKRLP
PPAISLRSKSMTSELEEMVSPWKKKSEYEQQPPPPPVPSMEKKRTVYQMALNKLDEILAA
AQQTISASEGPTPGGLASLGKHRPKGYFATESNFDPHHRSQPSYERPPYLPPGPGLMLRQ
KSIGAAEDERPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPS
LRGGPFNPSSSVHPASSPSSFDGPSLPEGRLGARERSLYHGGALPPAHHHPPHHHHHAPP
PQTHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAASPSHHASV
AGGGPSSSASSSVAAASMQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGE
PQKGGSLAASPTSPASPQPPPPAAPEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPG
QAEPTGGSGGPGSNSPAPVPAPAPPLSPGPPSPSPVPTPASPSGPATLDFTSQFGAALVG
AARREGGWQSEARRRSTLFLSTDAGDEDALAGAGSGGAGTGVGAPPGPRLRHSKSIDEGM
FSAEPYLRLEAGAGSYGAYAAAGGRSYTGSGGSGSSAFSSFLPPRPLVHPLTGKALDPSS
PLGLALAARERALKESSEGGVAPQHVPRPPSPRYDAPPPTPHHHEPVLRLWGAPDPGHRR
EPSYRAGLGSQEKAVLASPPTARRSLLHRLPPTAPGGMGPLLLQLGPEPPGVAKAWRSSV
PDDPDRLPLHVRFLENCQPRVPGASAITMPVAQGAPSEDGPRRMPPPPPPGSPRRSVPAS
PTSPRPTEENGLPLLVLPPPAPSVDVDDGDLLFVEPLPPPLEFSNSFEKPESPHTMPTAE
QVAPPAPAPPAVAAPAPPAALDSTPSSLTSYDSEVATLTQGTPATPGDTPAAGPPPPAPP
STAATASSAPPAAPAPGPDPPAPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGA
GGSAGGTGVGTGPELLDTYVAYLDGQAFGGTSSPGPPYPPQLMTPSKLRGRALGAGGLRA
GPGGALRDPVTPTSPTVSVTGAVTGTDGLLALSACSGPSTAGVTGGSVPLDPEVPPLPSA
SSLPRKLLPWEESPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSPGAGGA
LPWARSGSGASGDSHHGGASYVPERTSSLQRQRISDDSQPSILSKPVSSLFQNWSKPPLS
PLPPGSGVSPAAAGGSQGATSPSGSSSSTSTRHLPGVDFEMRSPLLRRAPSPSLLPASEH
KVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGPGGTADPFAPVFVPPHPGISGGLGGAL
SGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHL
PALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtccagcgaggacgaggacccacacagcgtcagcgagtgtccc
gaggggggctccgagtccgagagctccccagacgggcccgggagaggcctccgggggacc
cggggccggggtcacagcggagcaccccccactagcctggcctccatccgaggcctccaa
ggccgctccatgtccgtcccggacgacgcccacttcagcatgatggtcttcaggatcggc
atcccggacttgcaccagacaaaatgcctgcgcttcaaccccgacgccaccatctggacg
gccaagcagcaggtgctgtgcgcgctgagcgagagcctgcaggacgtgctcaactacggc
ctcttccagcccgccacgtcgggccgcgacgccaacttcctggaggaggagcggctgctg
cgggagtacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacc
cgcgtttacaaacagaccaacctggacgagaaacagctggccaaattgcacaccaagacg
ggtttgaagaagtttctggaatatgtgcagctcggcacatcggacaaggtggcccgtctg
ctgaacaaagggctagaccccaactaccatgactcagattcgggagagacgcccctgacg
ctggctgcgcagaccgagggctctgtggaggtgattcgaaccctgtgcctaggcggggcc
cacatcgacttccgtgcccgggatgggatgacggctctgcacaaagctgcctgtgcccgc
cactgcccggctctcacggcgctcctggatcttggggggtcccccaactacaaggaccgc
cgggggctgaccccgctgttccacactgcgatggtggggggcgacccccgctgctgcgag
ctgctgctttacaaccgggcccagctgggcgtggcggatgagaacggctggcaggagatc
caccaggcctgccagcgtggccactcccagcacctggagcacctgctcttctacggggcc
gagcctggagcacagaacgcctcggggaacacggcgctgcacatctgtgccctctacaat
aaggaaacttgtgctcgcgttctcctgtatcggggtgccagcaaggatgtgaagaacaac
agtggacagacgccattccaggtggcggtgatcgctgggaattttgaactgggggagttg
attcgaaaccatcgcgaacaggatgtagtgcctttccaggagtcccccaaatacgcggcc
cggcgccggggcccccctggagcggggctgaccgtgccccccactcttctgcgggccaac
agtgacaccagcatggcgctgcccgactggatggtgtttgccgcgccagggggctcgtcc
tcaggaacccccggccccagctcagggccccttggccagtcacagccatcggccgtgggc
accaagctcaacactgggaccctgcgaagtgccagcagccctcgggggccccgggcccgc
tccccatcccgcgggaggcagccggaggacgccaagaagcagccccgtgggcggcccagc
tccagtgggacccctcgggaagggcccgcggggggcaccagcagctcagggggacccggg
ggttccctaggcagccgtgggcgtcgccgtaagctctactcggctgtgcccggtcgctcc
ttcatggccgtaaagtcgtaccaggcccaaggcgagggcgagatttctctgagtaaaggc
gagaagatcaaagtgctcagtatcggggaaggaggcttctgggaaggccaggtcaaaggt
cgtgttggctggttcccttcggagtgcctggaggaggtggccaaccgctcccaggaggga
aagcaagaaagtcgcagcgacaaagccaagaggctcttccgacactacactgtggggtcc
tatgacagcttcgacgccccgagcttgaaggatgggattggtcccgggagcgattacatc
atcaaggagaagacggtgctgctacagaagaaggacagtgagggctttggcttcgtgctg
cggggggccaaggcgcagacccccatcgaggagttcacccccacgccggcctttcccgcg
ctgcagtacctggaatcagtggacgaaggcggcgtggcctggcgcgcggggctgcgcatg
ggagatttcctcattgaggtgaatggccagaacgtggtgaaggtgggtcacaggcaggtg
gtgaacatgattcgtcagggtggcaacacgctgatggtgaaggtggtgatggtcacccgg
caccccgacatggacgaggcggcccacaagaaagctccccagcaggctaagcgactcccg
ccccctgccatctccctgcgttccaagtccatgacctcagagctggaggagatggtctcc
ccctggaagaagaagagtgagtacgagcagcagccgccaccgccgcccgtgcccagcatg
gagaagaagcggaccgtgtaccagatggcgctcaacaagctggatgagatcttagcggca
gcccaacagaccatcagcgccagcgaggggcccacgcccggcggcctggcatccctgggc
aagcaccggcccaaaggctactttgccactgagtcaaacttcgacccccaccatcggtcc
cagcccagctacgagcgacctccttacctaccaccaggccctgggcttatgcttcggcag
aaatcgataggggctgccgaggatgagcggccctacctggcgcctcccgccatgaagttc
agccgcagcctgtcggtgcccggctcggaggacatccccccgccgcccaccacgtccccc
ccggagcccccttacagcacccctcccgccccgtcctcctcgggccgcctcaccccgtcc
ctgcgcgggggccccttcaaccccagctccagcgtccacccggcctcgtcgccgtcgtcc
ttcgacggcccttccctccccgagggccgcctcggggcgcgcgagcgcagcctgtaccac
ggcggggccctgccgcccgcgcaccaccacccgccccatcaccaccaccacgcgccgccg
ccccagacgcaccaccaccacgcgcacccgccgcacccgcccgagatggagacggggggc
tcccccgacgaccccccgccccgcctggccctggggccgcagcccagcctgcgcggctgg
agaggcggcgggcccagccccacgccgggcgccgcgtccccgtcgcaccacgccagcgtg
gcaggcggcgggccctcctcctccgcctcctcctccgtggccgccgcctccatgcaggcg
cccgcgctgcgctacttccagctgcccccgagggcggccagcgcggccatgtacgtgccc
gcccgctcgggccgggggcgcaaaggcccgctggtgaagcagaccaaggtggagggcgag
ccgcagaagggcggcagcctggccgcctcgcccacgtcgcccgcgtccccgcagccgccg
ccccccgccgcgccggagaagaactccatccccatccccaccatcatcatcaaggcgccg
tccaccagcagcagcggccgcagcagccagggcagcagcaccgaggccgagcccccgggc
caggccgagcccacgggcggcagcggcgggcccggctccaactccccggcgcccgtgccc
gcgcccgcgccgcccctctctccggggccgccctcgccctcgcccgtgcccacgcccgcc
tcgcccagcggcccggccaccctggacttcaccagccagttcggggcggccctggtgggc
gcggcgcggcgcgagggcggctggcagagcgaggcccgccggcgctccacgctcttcctc
tccaccgacgcgggcgacgaggacgcactggccggcgctggcagcggcggcgccggcacc
ggagtgggcgcgcccccaggcccgaggctgcgccactccaagtccatcgacgagggtatg
ttctccgccgagccctacctgcgcctggaggccggggccggctcctacggggcctatgcg
gcggccgggggtcgctcctacacgggcagcggcggcagcggcagcagcgccttctccagc
ttcctgccgccgcggcccctggtgcacccgctgacgggcaaggccctggacccctcctcg
ccgctcgggctggccctggccgcccgcgagagggccctgaaggagtcctcggagggcggc
gtggcgcctcaacacgtgcccaggccgccctcgccgcgctacgacgcgccgccacccacc
ccgcaccaccacgagccagtgctgcgcctctggggcgccccggacccggggcaccgtcgg
gagccgagctaccgggccgggctgggcagccaggagaaggccgtgctggccagcccgccc
accgcgcgccgctccctgctgcaccgcctgcctcccacggcacccggtggcatggggccg
ctcctgctgcagctgggccccgagcccccaggcgtggccaaagcctggaggtccagcgtc
cccgacgaccccgacaggctacccctgcacgttcgcttcttggagaactgccagccccgc
gtgcccggtgccagcgccatcaccatgcccgtggcgcagggcgcaccgtcggaagacggg
ccccggagaatgccgccgccgccgcctccaggtagtccacggcgctctgtgcccgcgtcg
cccacgtccccgaggcccaccgaggagaatggcctccccttgctggtgctgccgccgcct
gcgccatccgtggacgtggacgacggcgacctgctcttcgtggagccgctgccgccgccc
ctcgagttctccaacagcttcgagaagcccgagtcgccccacacgatgcccaccgccgag
caggtcgcgccccccgcgcctgcgccccctgccgtggcggcccccgcgcccccagccgcc
ctggactccacgccgtccagcctcacgtcctacgacagcgaggtggccacgctgacgcag
gggacccccgccaccccaggggacaccccggccgcggggccaccaccacccgcgccaccc
tccacggctgccaccgcctcctccgcaccacccgccgctcccgcgcccggccccgacccg
cccgcgcctggcaccgactcgggcatcgaggaggtggacagtcgcagcagcagcgaccac
ccgctggagaccatcagcagcgcgtccacgctcagcagcctgtcagccgagggcggagct
gggggcagcgcagggggcaccggcgtgggcaccgggccagagctcctggatacctacgtg
gcctacttggacggccaggccttcgggggcaccagctcgccgggacccccttacccaccg
cagctcatgactccatccaagctgcgcggccgggcattgggggccgggggcctgcgtgca
gggcccgggggtgccctccgggaccccgtcacccccaccagccccaccgtctctgtcacc
ggggccgtcaccggcaccgacgggctcctggccctgagcgcatgttccggaccctcgacg
gcaggcgtgaccgggggctcggtgcccctggacccggaggtaccccccttgccatctgcc
tcctccctgcctcggaagctgctgccctgggaggagagccccggacccccaccaccaccc
ctgcccggtcccctggcacagccacaggcgtccgccttggccacggtcaaagccagcatc
atcagcgaactcagctccaagctccagcagttcgggggctcgcccggagcggggggcgcg
ctgccctgggcacggtcaggcagcggggccagcggggacagtcaccacggcggagccagc
tacgtgcccgagaggacctcatccctgcagcgccagagaatctccgacgactcccagccc
tccatcctctccaaacctgtcagcagcctgtttcagaactggtccaagccgccgctgtca
ccgctgcccccaggaagcggggtgtcccctgcagctgccgggggctcccagggggccacc
tcgccctcaggctcttcctcctccacgtccacccgccacctcccgggcgtggacttcgag
atgcgctccccgctgctccgccgggcccccagcccctccctgctgccggcctcggagcac
aaggtcagccccgcaccccgaccctcgtccttgcccatcctgccttccggacccctctac
cctggcctcttcgacatccggggctcccccaccggaggcccaggaggcaccgccgacccc
ttcgcccccgtcttcgtgccaccgcaccccgggatttctgggggactggggggagccttg
tcgggggcctcccgctcgctgtcacccacgaggctcctgtcgctgcctccggacaagccc
ttcggcgccaagccactgggcttctggaccaagttcgatgtggccgactggctggagtgg
ctgggcctggccgagcaccgagcccagtttctggaccacgagatcgacgggtcccacttg
ccggccctgaccaaggaggactacgtggacctgggggtgacccgcgtgggccaccgcatg
aacattgaccgggccctcaagttcttcctggaaaggtga
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