Suncus etruscus (white-toothed pygmy shrew): 126028096
Help
Entry
126028096 CDS
T09902
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04517
IgSF CAM signaling
setr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126028096 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126028096 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126028096 (SPTBN4)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126028096 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
126028096 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
126028096
NCBI-ProteinID:
XP_049643086
LinkDB
All DBs
Position
14:84767088..84862622
Genome browser
AA seq
2574 aa
AA seq
DB search
MAQVSGEVDNMEGLGTPNNNNNNPASRWESPDRGWEREPPAASTAAASLFECSRIKALAD
EREAVQKKTFTKWVNSHLARVGCHIVDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRI
HSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNR
ETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNA
NYNLQRAFRTAEQHLGLTRLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRI
GKVLDQVLEVGKIIERYEELAAELLAWIQRTVGLISNQKFANSLSGVQQQLQAFTAYCTL
EKPVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAAL
RAELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEAD
IAAYEERVQGVAELAEALATEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLAL
QKVFQEMVYMVDWMEDMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAA
ALRFSQLQGYQPCDPQVICNRVSHVHGCLAELQEQAARRRADLEASRSLWALLQELEEAE
SWARDKERLLEAAAAAASGTAGAAGPAGGAHDLSSTARLLAQHKILQGELGGRRALLQQA
LRRGEELAAGGVAVGAGAGADPAPLAGLAERATSARRRWQRLEEAAARRERRLQEARALH
QFGADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGSLRRQL
ANLGGAGGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELW
IGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNVTVQELVEGGHPSSD
EVRSCQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRSQVREKRRAVESAPRA
GGALQWRLSGLEAALQALEPRQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALASS
AQACGEAVAAAGRLQRFLHDLDAFLDWLVRAQEAASEGPLPGSLEEADALLTRHAALKEE
VDQREEDYARIVAASEALLAGDGAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQA
HVYQLFLRDLRQACAVLRNQEVALSGMELPGTVESVVEALKQHRDFLTTMELNQQKMQVA
VQAAQGLLRQGNVYGAQAQEAVTRMLEKSQENQLRAHQWMEKLHDQLGLQHFLRDCHELD
GWVREKMLMARDGSRGDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELA
ASVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVGP
GGDLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGEKQNAVGERLV
RLLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGNGLQAVQQHMKKNQ
GLRREIQAHGPRLEEVLERAGALASLRSPDAEAVRHGQEQLQSAWVGLQEAAERRQQMLD
AAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIA
QLSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVRLEQQYWLYQLSRQVDE
LEHWIAEKEVVAGSPELGQDFEHVTVLQEKFSEFASETGTAGRERLAAVNQMVDELIECG
HTAAATMAEWKDGLNESWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLP
RLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQ
EVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVE
VLMNYHQGLKTELEAREPELTACQELGHSLLLNKSAMADEIQAQLDKLRTRKEEVSEKWD
RHWGWLQQMLEVHQFAQEAVVADAWLTAQEPILQSAELGSSVDEVEQLIRRHEAFRKAAA
AWEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPADLAAKAAPLLRPASYERALE
PLARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEVPVRVEPTTPPPQPSAAAPEA
APEAPGPPPAVVEQVRVRPERQESAEHHRAEELPRRRRPERQESVDQPEETARRRRSERQ
ESAEHEAAHSLTLGRYEQMERRRERRERRLERQESSEQETPVRGELVKGKATLADIVEQL
QEKEAGPGLPAGPSLPQPRELPPGRLPNGLEPPDRTPRPDRPRARDRPKPRRRPRPREGG
EGGGSRRSRSAPAQGGSAPAPPAPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLS
KGELGFYKDSKGPASGGTHGGEPLFNLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAK
DEEEMNGWLEAVAASVGEHAEIARWGQTLPTTSSTDEGNPKKEAGERRASGRRK
NT seq
7725 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtatcgggggaagtggacaacatggagggcctgggcacccccaacaacaac
aacaacaaccctgccagccgctgggagagtccagatcgcggctgggaacgggagccaccc
gctgcttccactgctgcggcctcgctctttgagtgctcccggatcaaagctttggcagat
gagcgggaagctgtgcagaagaaaaccttcaccaagtgggtcaactcgcacctggctcgc
gttggctgtcacatcgtggacctctatgccgacctccgcgacggcttcgtactcacacgg
ctcctggaagtgctgtctggggagcagttgccaaggcccacacgcggtcgcatgaggatc
cactccctggaaaatgtcgacaaggccttgcagtttctgaaggagcagcgcgtgcacctg
gaaaacgtgggctcgcatgacattgtggatgggaaccaccggctcaccctgggactcgtc
tggaccatcatcctgcgctttcagatccaagtcatcaaaattgaaactgaggacaacagg
gagacgcgctcagccaaggacgcgctgctcttatggtgccagatgaagacagctggttat
cctgaggtgaacatccagaacttcaccaccagctggcgggatggcttggccttcaatgcc
ctcattcaccgacacaggcctgatctcgtggacttcagcaaactcaccaagtccaacgcc
aactacaacttgcagagagccttccgcacagctgagcagcatctgggtctgacccgcctg
ctggatcctgaggatgtgaacatggaggccccagatgagaagtccatcatcacctacgtg
gtctctttctaccactatttctctaagatgaaggctctggcagtggaagggaagaggatc
ggaaaggtcctggaccaggttttggaggtaggcaagattattgagcgctacgaggagtta
gcggccgaactgctggcctggattcagcgcaccgtgggcctcatcagcaaccagaagttc
gccaactcgttgagtggggtgcagcagcaacttcaggccttcacggcttactgtacgctg
gagaagccagtcaagtttcaggagaaggggaatctggaagtgctgctcttcagcatccag
agcaagctgcgggcctgcaaccgtcgcctctttgtacctcgggagggctgtggcatctgg
gacatagacaaggcttggggccagctggagaaggcagagcacgagcgggaggctgccctg
cgggccgagctcatcaggcaggagaagctggagttactggcccagaggtttgaccacaaa
gtggctatgagagagagctggctgaacgagaaccagcgtttggtgtcccaggacaatttt
ggctatgagctgccggcagtggaggcggctatgaagaagcatgaggccattgaggccgac
atcgcagcctatgaggaacgggtgcaaggagtggctgagctggcagaggccctagcgaca
gagggttattatgatgcccgccgggtggctgcccaacgcgacagcgtcctgcgccagtgg
gccctgctcactggacttgtgggtgcccgacgaacccggctagagcagaatctggcactg
cagaaggtcttccaggagatggtgtacatggtggactggatggaggacatgcaggctcaa
ctgctgtcccgcgagtgtggccagcacctggtggaggccgaggacctgttacagaagcac
ggactgttggaaggggacattgcggcccagagcgagcgggtggaggcgctcaacgccgct
gccctgcgtttctctcagctgcagggctaccagccgtgcgacccgcaggtcatctgcaac
cgcgtgagccatgtgcacggctgcctagcggagctgcaggagcaggcggcacgacggcgc
gcggacctcgaggcctcgcggagcctctgggcgctgctgcaggagctggaggaggccgag
agctgggcgcgggacaaggagcgtctcctggaggcggcggcggcggcggccagcggcacg
gcgggggcggcggggccggcgggcggcgcgcacgacctgtccagcaccgcgcgcctcctg
gcgcagcacaagatcctgcagggcgagctgggagggcggcgggcgctgctgcaacaggcc
ctgcggcgcggcgaggagctggccgcgggcggcgtggcggtgggcgcgggcgcgggcgcg
gacccggcgccgctggcggggctggcggagcgcgccacgagcgcgcgacggcgctggcag
cggctggaggaggcggcggcgaggcgcgaacggcggctgcaggaggcgcgggcgctgcac
cagttcggcgccgacctcgacgggctcctggactggctgcgcgacgcctaccgcctcgcc
gccgcgggcgacttcggccacgacgaggcttccagccgccgcctggcgcgccagcaccgc
gcgctcaccggcgaggtggaggcgcaccgcgggcccgtgggcagcttgcggcgccagctg
gccaacctggggggtgccggcggcgcggggcccctggtcgtggctctgcaagtgcgcgtg
gtggaggccgagcagttgttcgccgaggtgaccgaggtggccgcgctgcgacgccagtgg
ctgcgggatgccttggccgtctaccgcatgttcggcgaggtgcacgcgtgcgagctgtgg
atcggcgagaaggagcagtggctgctcgccatgcgcgtgccggactcactcgacgacgtc
gaggtggtgcagcatcggtttgagagtctggaccaggagatgaacagcctgatgggccga
gtcctggatgtgaacgtcaccgtccaggaactggtggaaggaggtcatcccagctccgat
gaggtgcgctcctgccaggatcacctaaacagcagatggaaccgcatcgtggagttggtg
gaacagcgcaaagaggagatgagcgcggtgctactggtggaaaaccatgtgctggaggtg
gccgaggtgcgctcgcaggtgcgcgagaagcggagggcagtggagagtgctccccgagcc
gggggcgccctgcagtggcgcctgagcggcctggaggcggccctgcaagcactggagccc
cgccaggcagccctcctggaggaggcggccctgctggcagagcgcttcccagcgcaggcg
acgcggctgcaccagggcgcggaggagctgggcgccgagtggggcgcgctggccagctcg
gcccaggcgtgtggcgaggcggtggcagccgccgggcgcctgcagcgcttcctgcacgac
ttggacgctttcctggactggctggtgcgcgcccaggaggcggcgagcgaggggccgctg
cccgggagcctggaagaggcggacgcgctgctgacgcgccacgcggcgctcaaggaagaa
gtggaccagcgcgaggaggactatgcgcgcatcgtggcggccagcgaggcgctgctggct
ggcgacggcgccgagctgggcccgggtctggcgctcgacgagtggctgccgcacctggaa
gtcggctggcacaagctgctgggcctttgggaggagcgcagggaggcgctggtccaggca
cacgtctaccagctcttcctgcgggacttacggcaggcgtgcgctgtgctacgcaaccag
gaggtggccttgtcgggaatggagctcccgggcacggtggagtcggtggtggaggcattg
aaacagcaccgggatttcctcaccaccatggaactgaaccagcagaagatgcaggtggcc
gtgcaggctgcccaaggcctgcttcggcagggcaatgtctacggggcgcaggcgcaggag
gctgtgacacggatgctggagaagagccaagaaaaccaactgcgggcccatcagtggatg
gagaagcttcacgaccaactcggactgcagcacttcctgcgagactgccacgagctggat
ggctgggtccgtgagaagatgctgatggcgcgcgatggttcacggggagacggccacaag
ctgcacaagcgatggctccggcaccaggcattcatggccgagctggcacagaataaagag
tggctggagaagattgagcgggagggtcaacagttgatgcaagagaagccggagctggca
gcctcagtaaggaagaagctcggggagatccggcagtgctgggccgagctagagagcacc
acacaggccaaggcgcgccagctcttcgaggccagcaaggccgaccagctggtgcagagc
ttcgctgagctggacaagaggctccttcacatggagagccagcttcaggacgtgggcccc
ggcggtgacctggccacagttaacagccaactcaagaagctgcagtcgatggagtcgcag
gtggaggagtggtaccgcgaggtgggcgagttgcaggcacagacggcggcgctgcccctg
gagccggccagtaaggagctggtgggcgagaagcagaacgcggtgggcgagcgcctggtg
cgcctgctcgagcccctgcaggagcgccgccggctgctgctcgcctccaaggagctgcac
caggtggcgcacgacctggacgacgagctggcatgggttcaggagcgactgccactggcc
atgcagacagaacgaggcaatggtctgcaggctgtgcagcagcacatgaaaaagaaccag
ggcctgcgacgggagatccaggcccatgggccgcgcctggaggaggtgctggagcgcgcg
ggcgcgctggcctcgctccgcagccccgacgccgaggccgtgcgccacggccaggagcag
ctgcagagcgcctgggtcggcctgcaggaggcggccgagcggcggcagcagatgctggac
gccgccttccaggtggagcagtactacttcgacgtggccgaggtggaggcgtggctgggc
gagcaggagctgctcatgatgagtgaggacaagggcaaggacgagcagagcacgctgcag
ctgctcaagaaacacctgcagctggagcagggcgtggagaactatgaggaaagcatcgcg
cagctgtcgcgccagtgccgggcgctgctggagatgggccacccggacagcgagcagatc
agccggcgacagtctcaggtggaccgactgtacgtggcgctcaaggagctgggcgaggag
cggcgggtgcgcctggagcagcagtactggctgtaccagctcagccgccaggtggacgag
ctggagcactggatagccgagaaagaggtggtggcgggctcccctgaactcggccaggac
tttgagcacgttacggtgctgcaggagaagttctctgagttcgccagcgagacgggcaca
gcagggcgggagaggctggcagccgtgaaccagatggtggacgagctcatcgagtgtggc
cacacggcagcggccaccatggccgagtggaaggacgggctaaacgagtcatgggccgag
ctgctcgagctgatgggcacgcgggcacagctgctggctgcctcccgggagctgcataag
ttcttcagcgatgctcgagagctgcagggacagatagaggagaagcgcaggcggctgccc
cgcctgactgcacccccagagcccagacccagtgccagctccatgcagcgaacgctgcgt
gccttcgagcatgacctgcagcttctcgtgtcccaggtgcggcagctgcaggagggggcg
gcacaactgaggaccgtgtatgcgggggaacatgcggaggccatcgccagccgggagcag
gaggtgctgcagggctggaaggagctactggccgcctgcgaggatgcgaggctgcatgtc
agttccacggccgacgccctgcgcttccacagccaggcccgggacctgctctcctggatg
gacggcatcgcgggccagatcggggctgctgacaaacccagggatgtgtcctcggtggag
gtgctcatgaactaccaccagggcctgaagacagagctggaagcaagggagcccgagctg
acagcctgccaggagctgggacactctctgctgctcaacaagagcgccatggccgacgag
atccaggcacaactggacaagctgagaaccaggaaggaggaggtgtcggagaagtgggac
cgccactggggatggctgcagcagatgctggaggtacaccagtttgcccaggaggcagta
gtggcagacgcctggctcacggcgcaggagcccatactgcagagtgcagagctaggcagc
agtgtggatgaggtggaacagcttatccggcgacacgaggccttccgaaaagcagccgcg
gcctgggaagagaggttcagctctctgcggcgcctgaccacgatcgagaagctcaaggcc
gagcagagcaagcagccgcccacgcctttgctggggcgcaagttcttcggagaccccgcg
gacctggccgccaaggccgcgcccctgttgcggccggcgagctacgagcgggccttggag
cccctggcccgccgggcctccgacacgctgtcggccgaggtgcggacccgggtggggtac
gtgcgccaggagctcaagcccgagcgcctgcagccgcgcatcgaccggctgcccgaggtc
ccggtgcgagtggagcccacgaccccgccgccgcagccgtcagcggccgcccccgaggcc
gctcccgaggccccggggcctcctccggccgtggtggagcaggtccgagtgcggccggag
cgccaggagtcggccgagcatcatcgcgcggaggagctgcccaggaggcggcggcccgag
cggcaagaatcggtggatcaacccgaggagactgcgcggagacggaggtcagagcgacaa
gagtctgcggagcatgaggcggctcacagcttgacgctaggccgctacgaacagatggag
aggcgacgggagcggcgggaacggaggttggagcgacaagagtccagcgagcaggagacg
cccgtccggggagagctggtcaaggggaaggccaccttggcggacattgtggagcagctg
caggaaaaagaagcgggccctgggctccctgctgggccgtcgctgccacagcctcgcgag
cttcccccgggccgcctgcccaacgggctggagccgcccgatcggacgccccggcccgac
cggccgcgggccagggaccgacccaagccacgacggcggccacggccccgagaaggcggc
gagggcgggggcagccggcgctctcgctccgccccagcccagggaggctccgcccccgcg
ccgccggccccgcccacacacacggtgcagcacgagggcttcctgctgcgcaagcgcgag
ctcgacgcgaaccgcaagtcgtccaaccggtcgtgggtgagcctgtactgcgtgctcagc
aagggggagctcggcttctacaaggactccaagggcccagcatccgggggcacacacggc
ggggagcctctgttcaacttgcacaaggccaccagcgaggtggctagtgactacaagaag
aagaagcatgtcttcaaactccagacccaggatggcagtgaatttcttctccaggctaag
gatgaggaggagatgaacggctggctagaggccgtggccgcctctgtcggggagcacgcc
gagattgcccgctggggacagacactacccaccacctcttccaccgacgagggcaacccc
aagaaggaagctggggagcgccgggccagcgggcgtcggaagtga
DBGET
integrated database retrieval system
