Suncus etruscus (white-toothed pygmy shrew): 126028097
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Entry
126028097 CDS
T09902
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126028097 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126028097 (CIC)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126028097 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
126028097
NCBI-ProteinID:
XP_049643089
LinkDB
All DBs
Position
14:86295613..86651814
Genome browser
AA seq
2507 aa
AA seq
DB search
MKPMKKTCTGLPGPGSGSRSPPATRAKALRRRGAEEGDKPEEEEDETQPPPPLPPGPEEA
EGEEEAERGPRAEGLTPELHPDDQTPGVVEDPKIEGEAGRWEPSLSRKTATFKSRAPKKK
YVEEHGTCGAAGGPEEQARTPEEAGAPGVPPRPPTSTRSSSTDTASEHSADLEDEPAEAG
GPGAWPQGGSGASYDLRQLRSQRVLARRSDGLFLPAVVRQVRRSQDLGVQFPGDRALTFY
EGAHGGGGGAGGSSVDVVLDATPPPGALAVGTAVCTCVEPGVAAYRAGVVVEVATKPAAY
KVRLSPGPGSQAGPPTGPPQASQLPHREAEEAVWVARSSLRLLRPPWEPEALPRKPPMGP
DEEHAEPGAPLPPCPAALDPKQPEDAEVSKISFGGNLGTCEEGEEKHPPALGTPALLPLP
PPQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGVTPTARARTPLTAA
QQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLAD
SGPGGAGRAAGVVAREGSAEFEWGDETSRDSEASSVATRGDSRPRLVAPTDLSRFEFDEC
EAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRSA
VRSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTE
LLPHPGALGAPGSGPGGAAPDFPKSDSLDSGADTVSHTPTPSTPAGFRSVSPAVPFSRSR
QPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFAGEVGTASEVRAG
GTGRGCRETPIPPGVTSGKAGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVA
FHPSPAALLPVLVPSSYASHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQ
PDPSVQPSEAQQPSSHSVTSNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGP
PHTLGGVDPGKGPPPTTEEETPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRR
TQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTV
SKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPPNLGLAG
GHKEARERSMSETGTAAAPGMSSELLSVAAQTLLSSDTKAPGSGSCGTDRLHTVGGPGSA
RPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSAQYGAPGPFAAPGEGGAL
AASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSAADIDLKCKER
VTDSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPPIDPEPPGPPDPPTAFVKGYTS
APSSCSPAASSASAASSFPLGSGTFKTQESGQGSSSGPLRPPPAGSGSPATPSKATRFLP
TDPAPFRRKRPESVGGLEPPVPSVIAVPPGGGGGILQGLALPPSKEDREGSGARMPAAPA
SSLAYGAPTAPLTRPAATMVTSVVRPVSSTPVPIASKPFPPSGRAEASPNDSAGARTETA
GGSPLGVSLVYSDKKTAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGTPAPPAV
QFIAQGAPGSGASAGSGATAASGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQV
APAPAPAPGTKTAASGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPSIPILQSVPSAPPP
KAQSVSPVQVPPPGGSAQLLPGKVLVPLATPSVSVRGSGTGQPLPLVSPPFSVPVQNGAQ
PPSKIIQLTPVPVTTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHALPLG
TSPASSQPGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQ
LPPTCTATGGPIITAFYPGSPAPTSSAPLAQPSQANPGLVYTVATSTTPPAAATLPKGPP
GPAAATPAPTSPFPSATGSMTYSLVAPKAQRPVPKAPQKVKAAIASIPVGSFEAGAPGRP
GPASRQPLEPGPSRETPAPESELEGQPTTPGPPPPPEAWPPGARSSPPPPPAAEERGSTK
GAESIASKFPSSAADWRVPGLGLENRAEPPAPPSPAPGSSSGGGNGEGGSGRAAGDTPER
KEATGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLAT
SPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDR
TGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIF
PSKVCLQLKIREVRQKIMQAATPTEQPPGAEASLPGPPPTGATAAPGPTPSPAGVPDPTS
PGSDSGTAPAAPPLPPPPEPAPGQPGWEGPSPASPQPPGPSTAATGR
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatgaagaagacatgcacaggtcttcccggtcctggcagtgggagcaggtcc
ccaccagccacccgagccaaggccctgcggcggcggggtgctgaggagggtgacaagccc
gaggaagaagaggatgagacacagccgccaccgccactgcctccagggccagaagaggct
gaaggtgaggaggaggccgagcggggtcccagggccgagggcctgaccccagagctgcac
cctgatgaccagaccccaggcgtagtggaggaccccaagatagagggagaggcaggccgc
tgggagccgtccctcagtcggaagacagccacgttcaagtcacgtgcgcccaagaagaag
tatgtggaagagcatgggacctgcggggcagcggggggccctgaggagcaggctcggacc
cctgaggaggctggtgccccgggggtgcctccacggccccccacctccacccgctcctcc
tccaccgacacagccagtgagcactcggctgacctagaggatgagccagccgaagctggg
gggccgggggcctggcctcagggcggctctggggccagctatgacctccggcagcttcgg
tcccagcgtgtgctggcccgccgcagcgacggcctctttttgcctgctgtggtgcgccag
gtacgccgaagccaggacttaggagtgcagttcccaggggatcgggccctaactttctac
gagggggcacatgggggcggtggcggcgctggtggcagctcggtggatgtggttctagat
gccacaccgcccccgggcgcgctggcagttggcacggctgtgtgtacctgtgtggaaccc
ggtgtggctgcctaccgtgcgggtgtggtggtggaggtggccaccaagcctgctgcctac
aaggtccgcctcagcccaggcccgggttcccaagctggaccccccactggtccccctcag
gcctcccagctgccccaccgtgaggccgaggaggccgtgtgggtggctcgctctagcctg
cgactgctgcggcccccctgggagccagaggccctgccaagaaagccccccatgggccct
gatgaggagcatgctgaacctggagcccccctgcctccctgccctgcggccctggacccc
aagcagcctgaggatgccgaggtttccaagatcagttttggaggcaacctgggaacctgt
gaggagggtgaggagaagcacccgcctgccctgggcacccctgccctgctgccactgccc
cctccccaactcctttcaccgccccccaagtctccagccttcgccggacccggccgccct
ggtgagcagccgtcaccgtgccaggagggcagccagggtggcagcaggagcagcagcgtg
gcctccctggagaagggcgtgacacccactgcccgggcccgcactccgctaacagccgca
cagcagaagtacaagaagggcgacgtggtctgcacgcccaacggcatccgcaagaagttc
aacggcaaacagtggcgccggctgtgctcccgagacggctgcatgaaggagtcacagcga
cgtggctactgctcgcggcatctgtccatgcggaccaaggagatggagggcttggcggac
agtggccccggtggagcggggcgggctgctggcgtggtggcccgggagggcagtgccgag
tttgaatggggagacgagacgtcgagggacagcgaggccagcagcgtggccacccgcggg
gactcccgaccacgcctcgtggcccccactgacctttcccgctttgagttcgacgagtgc
gaggcagccgtgatgcttgtgtctctgggcagctcgcgatcgggcaccccatccttctcc
cccgtgtccacgcagtcccccttttcgccagccccgtccccctcgccctccccgctcttt
ggctttcgccctgccaacttcagccccatcaacgcctcacccgtgatccagcgctcagca
gtgcgcagccgccacctgagtgccagcaccccaaaggctggcgtgctgacgccccctgac
ttgggcccccacccgcctccacctgccccccgagagcgccattcctccggcatcctgccc
accttccagaccaacctgaccttcaccgtgcccatcagccctgggcggcggaagacggag
ctgctgccacacccaggggctttgggggctccgggctcaggacctggaggggctgccccg
gacttcccgaagagtgacagcctcgactctggcgcggacaccgtatcccacacgccgacg
ccctccactccggctggcttccggtctgtgtcgcctgctgtgcccttctcccggtcccgc
cagccctcgcccttactgctgttgcccccacctgctggcctgacttccgacccgggcccc
tcagtgcggagggtgcccgctgtgcagcgggattcgcctgtcatcgtccgcaaccccgac
gtgccactgccctccaaattcgcaggggaagtgggcactgccagtgaagtgcgggccgga
gggactggacggggctgccgagagaccccaatcccccccggagtgaccagtgggaaagct
ggcctgccccctcctctgccagccccagtgcccatcaccgtgcctcctgccgcgccaact
gctgtggcccagccgatgcccacctttggcctggcttcctcgccctttcaaccggtggcc
ttccacccctcccccgcggccctgttgcccgtcctggtgcccagcagctatgccagccat
cctgcgcccaagaaggaagtgatcatgggccggcccgggacagtgtggacaaacgtggag
ccacgctccgtggctgtgttcccctggcactcgcttgttcccttcctggcccccagccaa
cccgacccctccgtgcagccaagtgaggcccagcaaccttccagccactcagtgacctcc
aaccagagcaaagaacctgctgagtctgcagctgttgctcatgagcagcccccaggtggg
accgggaatgctgaccctgggcggccccccggagccacctgccctgagagcccagggcct
ccccacactttgggtggggtggaccctggcaaaggtccccctcccaccacagaggaagag
acccctgggcccccaggcgagtcccgactggacagcgagacggagagtgaccacgacgat
gctttcctctccatcatgtctcctgagatccagctgcctctgccaccagggaagcggcgg
acccagtccctcagcgctctgcccaaggaaagggactcatcctctgagaaggacggacgt
agccccaacaagcgtgagaaggatcacatccggaggcccatgaacgccttcatgatcttc
agcaagcggcaccgggccctagtgcaccagcgtcaccccaaccaggacaaccggaccgtc
agcaagatcctgggagagtggtggtatgccctggggcccaaggagaagcagaaataccat
gacctggcctttcaggtgaaggaagcccactttaaggctcacccagactggaaatggtgc
aacaaggaccggaagaagtccagctctgaggccaagcccccaaacctagggctggcaggg
gggcacaaggaggctcgagagcggagcatgtctgagacaggcactgctgctgcccccgga
atgtcctcagagctcctgtctgtcgctgcccagacgctcttgagctcagacaccaaagcc
ccggggagcggctcatgtgggacggaccgtctgcacacagtcgggggccctggctcagcc
cggcctcgggcattctcccacagtggggtgcacagcctggatggtggggaagttgacagc
caagcgctccaggagctgactcagatggtgtctggccctgcgtcctactccggcccaaag
ccctctgcccagtatggggcgccaggcccttttgctgctcccggtgagggaggggccctg
gcagccagtgggcgccccccgctgctccccacccgagcctctcgttcccagcgtgcagcc
agcgaagacatgacaagtgacgaggaacggatggtcatctgcgaggaggaaggggatgac
gatgtcattgctgatgatggtttcagtgctgctgacatcgacctcaagtgcaaggagcgg
gtgacggacagcgagagcggggacagctctggggaggacccagagggtaacaagggcttt
ggccggaaggtgttctcacccgtgatccgctcctccttcacccactgccgtcctccaata
gaccctgagcccccaggaccaccggaccctcctacagctttcgtcaaaggctatacttct
gctccctcttcctgctccccggctgcctcctctgcctcggctgcctcttccttcccactg
ggctcaggaaccttcaagacccaggagtcgggacagggcagctccagcggtcccctccgg
ccgccacccgctgggtctgggagtccagcaacaccttccaaggccactcgctttctccca
acggatcctgcccccttcaggcgcaagagaccagagagtgtggggggcctggagccgcca
gtcccctcagtcattgctgtgccaccaggcgggggtggtggcatcctgcagggcctggcc
ctgcccccaagcaaagaggaccgggagggcagtggtgcccgcatgcctgcagcccctgcc
tcatcactggcctatggggctcctaccgcccccctgacccgtccagctgctaccatggtc
accagcgtggtgcggcccgtcagcagcactcctgtgcccattgcctccaagccctttccc
ccctccggccgggcagaggcatctcccaatgactcggcaggtgctaggactgagactgct
ggagggtccccgctgggcgtcagtttagtgtattcagacaagaagacagcagccgccacc
tcaccagccccacatctggtggctggacccctgctgggcactgtggggaaagcacctgcc
acggtcaccaacctactggtgggcactccaggttatgggaccccagcgccccctgctgtc
cagttcattgcccagggagctcctggcagcggggccagtgcaggctcaggagcaactgca
gcaagtggccccaatggaccggtgcccttgggtatcctgcagccgggtgccctgggcaag
gctggagggattacccaggtgcagtacatcctgcccacgctgccccagcagctgcaggtg
gcgcccgccccagcaccagcccctgggaccaagacagcggcttctggtggccctgcaccc
accaccagcatccgcttcaccctcccaccgggcacctccaccaacggcaaagtcctggct
gccaccgcacccactcctagcatccccatcctgcagtccgttccctctgccccgcccccc
aaagcccagtccgtgtctccagtgcaggtgccgccacctggtggctcagcccagctgctg
ccagggaaggtcctggtgcccctggccacgcccagcgtatcagtgcggggcagtgggacc
ggccagccactgcccctggtgagcccccccttctcggttcctgtacagaatggcgcacag
ccccccagtaagatcattcaactgactccagtgcccgtgaccacccccagcggcctggtg
ccgcccctcagcccagccacactccccggacccacctcacagccccagaaggttctgctg
ccttcctccaccaggatcacctacgtccagtcggcaggagggcatgcactgcccctgggc
accagccctgcatccagccagcctggcaccgtcacctcatatgggcccacaagctctgtt
gcccttggcttcacctccctgggacctagtggcccagcctttgtgcagcccctgctttca
ggccaagctcctctgctggctcctggccaggtgggcgtgtcacctgtgcccagcccccag
ctgccccccacttgcacagctactgggggtcccatcatcacagcgttttaccctggcagt
cctgcacccacttcctcagcacctctggcccagccatcgcaggccaacccaggtctggtc
tacaccgtggccaccagcaccaccccacctgccgctgccaccctgcccaagggcccacca
ggccctgctgctgccaccccagcccccaccagtcctttcccaagtgccacaggctccatg
acttacagcttagtggcccccaaagcccagcggcctgtgcccaaggccccccagaaagtg
aaggcagccattgccagcattcctgtgggctcctttgaggcgggtgccccagggaggcct
ggcccagcatcccggcaaccgctggaacctggcccctcccgtgagactccagcccccgag
tctgagttggaggggcagccaacaactccaggccccccaccgcccccagaggcctggcct
cctggggctcggagcagcccccctccacccccagctgccgaggagcggggtagcaccaag
ggtgcagagagcattgccagcaaattccctagctcagctgcagactggcgtgtcccggga
ctgggcctagagaaccgtgcagagcctcctgcccctcccagccctgcacccgggagcagc
agtggcggcgggaacggcgagggcggcagcgggagggcagctggggacacccctgagcgc
aaggaggccacaggcaccggcaagaaggtgaaggtgcggcccccgcccctgaagaagacc
tttgactctgtggacaacagggtcctgtccgaggtggacttcgaggagcgctttgccgag
ctgcccgagttccggccggaggaggtactgccctcgcccaccctccagtctctggccacc
tccccccgtgccatcttgggctcctaccgcaagaagaggaagaactccacagacctggac
tcggcccctgaggatcccacctcacccaaacgcaagatgaggagacgctccagctgcagc
tcggagccaaacacccccaagagcgccaagtgcgaaggggacatcttcacctttgatcgc
acagggacagaagccgaggatgtgctgggagagctggaatatgaaaaggtaccctactcc
tcactgcgccgtaccctggaccagcgtcgtgccctggtcatgcagctgtttcaggaccac
ggcttcttcccctctgcccaggccacggctgccttccaggctcgctatgcggacatcttc
ccctccaaggtgtgtctgcagctgaagatccgtgaggtgcgccagaagatcatgcaggca
gccacgcccaccgagcagccccctggggctgaggcctcactgcctggaccaccccccact
ggcgctactgctgcccctggccccactcccagccctgcgggggtgcctgaccccacctct
cctggctcggactctggcacagccccagccgccccacctctgcctccaccccctgagcca
gcgcccgggcagcctggctgggagggcccctccccagcatctccgcaaccacccggccct
tccacggctgccacaggcaggtga
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integrated database retrieval system
