KEGG   Suncus etruscus (white-toothed pygmy shrew): 126028289
Entry
126028289         CDS       T09902                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126028289 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setr03400]
    126028289 (XRCC1)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     126028289 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 126028289
NCBI-ProteinID: XP_049643288
LinkDB
Position
14:complement(87995694..88021121)
AA seq 621 aa
MPEIRLRHVVSCSSQDSTHRAENLLAAEAYRKWRSARAGEKTISVVLQLEKEEQIHSLDI
GNDGSAFVEVLVGSSAGGGGEQDYEVLLVTSSFMSPSESRSGSNLNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFVRFHSPPDKDEAEASPQKVTKLGQFRVKEEDEGT
NSLRPGALFFSRINKTVPAAARDPAGPSYAAATLQASSSSAASPASTAVGSTVKPQESLK
GKRKLDLKQEERKAPSKPSASPSTPAPKKPKLLASSSHPAASSVPAPGKPREGTEPKAPR
AGPQELGQILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKY
SHVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEDEGDSHSDGEEASKMPRKR
VQTKTKAPQAAGPSSQQRPPTPEETKPATPELQEDVDSEGEQSGGQDNGAEDSGDTEDEL
RRVTEQRDQRQLTDQGENGEDPYAGSTDENTDNEDQPESPDLPVPELPDFFQGKHFFLYG
EFPGNERRMLQRYVTAFNGELEEYMSERVQFVITAQQWDPSFEEALMDNPSLVFVRPRWI
YNCNEKQKLLPHQLYGVVPQA
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtcgtgtcctgtagtagccaggactcgacccaccgt
gccgagaacctcctcgcagccgaggcctaccggaagtggcgctctgcccgcgcgggcgag
aagaccatctcggtggtgctacagctggagaaggaagagcagatacacagcttggacatt
ggcaacgatggctcggcctttgtggaggtgctggtgggcagctcggccgggggtggcggc
gagcaagactacgaggtccttctggtcacctcgtctttcatgtccccttctgagagtcgc
agtggctcaaacctcaaccgagttcgcatatttgggcctgataagttggtgcgggctgca
gctgagaagcgctgggaccgagtgaaaattgtctgtagccaaccgtacagcaaggactcc
ccctatggtctgagttttgtgcggtttcacagccccccggacaaagacgaggccgaggcg
tcaccccagaaggtgaccaagctcggccagtttcgtgtgaaggaggaggatgagggcacc
aattccctaagacctggggcactcttcttcagccgcatcaacaagacagtcccagctgca
gccagagacccagcaggccccagctatgcggctgccacactccaggcctctagttcctcc
gcagcctccccggcctccacagcagttgggagcaccgtcaagcctcaggaatctctcaaa
ggaaagaggaagctggatctaaaacaagaagaaaggaaggcccccagcaagccatcagct
tcaccctctacccccgcacccaagaaacccaaattgctcgcttcctccagtcacccagct
gccagctccgtccctgccccagggaagcctcgagaaggcaccgagcccaaggccccccga
gcgggcccccaggagcttgggcagatcctgcagggggtggtagtggtgctgagcggcttc
cagaatcctttccgctctgagctccgagacaaagccctggagctgggcgccaagtaccgg
ccagactggactccagacagcacccacctcatctgtgcctttgccaacactcccaagtac
agtcatgtcctgggccttggaggccgcatcgtgcgcaaagagtgggtgctggactgtcac
cgcatgcggcggcggctcccgtcccggaggtaccttatggctgggccgggctcaagcagt
gaggatgaaggggattctcatagcgatggggaagaagcctccaagatgccccggaagcgt
gtgcagaccaaaaccaaagcccctcaggcagcaggacccagctcacaacaaagaccccca
actccagaagagaccaaaccagccaccccagaacttcaggaagatgtcgattctgagggg
gaacagtcaggagggcaggacaatggagcggaagattctggggacactgaggatgagctg
agaagggtgactgagcagagagatcagaggcagctgactgaccagggggagaacggcgag
gacccctatgcaggatccacggatgagaacacagacaacgaagatcagccggagtcccct
gacctgccagttcctgagcttcctgatttcttccagggtaagcacttcttcctgtacggg
gagttccctggcaatgagcgaaggatgctgcagcgatacgtcactgccttcaatggggag
cttgaggagtatatgagcgagcgtgtccagtttgtgatcacggcccagcaatgggacccc
agcttcgaagaggctctgatggacaacccctccttggtgtttgtgcggccccgctggatc
tataactgcaacgagaagcagaagctgctcccgcaccagctttacggcgtggtgccccag
gcctga

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