Suncus etruscus (white-toothed pygmy shrew): 126028290
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Entry
126028290 CDS
T09902
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126028290 (NPAS1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
126028290 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
126028290
NCBI-ProteinID:
XP_049643289
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Position
14:90448439..90467774
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AA seq
582 aa
AA seq
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METHYPGSVPKGGAGGSVPWDFLPGLGGKTPPGACLQAQRKEKSRNAARSRRGKENLEFF
ELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGSPPWGLRAAGPPAGLAPGRRGP
LALVSEIFEHHLGGHILQSLDGFVFALSQDGKFLYISETVSIYLGLSQVELTGSSVFDYI
HPGDHSEVLEQLGLRGATPGPPTPPSVPSSSSSSNSSSSLADTLEIESSPAEAPRCAQAQ
ERSFFVRMKSTLTKRGLHLKASGYKVIHVTGRLRARALGLVALGHALPPAPLAELPLHGH
TVVFRLSLGLTILACESRISDHMDLGPSELVGRSCYQFVHGQDAARIRQSHLDLLDKGQV
TTGYYRWLQRSGGFVWLQSVATVAVSGKSPGERHVLWVSHVLSQPEDGQTPLDAFQLPAS
VAHEDVSSPEPETPEPPVGGKPAAPQEEDQSPQPRGKRIKAEPSPGDPPGPDDSSEEDLP
GAPTLLRPESTSVIRALKQDLVQPWGLAPPGAPPPPLLHAGFLAPVVRGLCTPGAIRYGP
TELGLMYPHLQRPGPGLPEAFYPALALPYAGPPGTRAPRKGD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggagacccactatcccgggagcgtacccaaaggcggcgccggaggcagcgtcccgtgg
gattttctgcccggattggggggcaagaccccgccgggagcctgcctgcaggcgcagcgc
aaggagaagtcgcgcaacgcggcccgctcgcggcgcgggaaggagaacctggaattcttc
gagctggccaagctgctcccgctgcccggagccatttccagccagctggacaaggcgtcc
atcgtgcgccttagcgtcacctacctccgcctgcgtcgcttcgccgcgctcgggtcccct
ccctgggggctgcgggccgcggggcctccggccgggctcgccccaggccgccgcggtccc
ctggcgctggtctcagaaatcttcgagcatcacctgggcggccacatcctgcagtccctg
gatggcttcgtgttcgccctgagccaggatgggaagttcctttacatctcagagaccgtc
tccatctacctgggactctcgcaggtggagctgacgggcagcagcgtcttcgattacatc
caccccggggaccactcggaggtgctggagcaactggggctgcggggggcgaccccgggg
ccccccactccgccctccgtcccgtcgtcttcctcctcctccaactcttcctcctcgctg
gcggacacccttgagatagagtccagcccggcagaggcaccccgctgcgctcaggctcag
gagcgctccttcttcgtccgcatgaagtccacgctcaccaagagagggctgcacctcaag
gcttcggggtacaaggtcatccatgtgactggccgcctccgggcacgagcgctgggcctg
gtggccctgggtcacgcgctgccaccagcaccgctggctgagctgcctctgcacggccac
acggtcgtcttccgcctcagcctggggctcaccatccttgcctgtgagagcaggatcagc
gaccacatggatctggggccctctgagctcgtggggcgcagctgttaccagtttgttcat
gggcaggacgcagccaggatccggcagagccacctggacctgctggacaagggccaggtg
accaccggctactaccgctggctacagcgctcgggcggcttcgtgtggctgcagtccgtg
gccaccgtggccgtgagcgggaagagcccgggggaacgccatgtgctgtgggtcagtcat
gtgctcagccaacctgaggatggccagacgcccttggacgccttccagctgccagccagc
gtggcccatgaggatgtgtccagcccagagccagagaccccagagcctcccgtgggaggg
aagccggcagccccccaggaggaggaccagagtccccagccccggggcaaacgcatcaaa
gcagagcccagcccgggggacccaccaggcccggacgacagcagcgaggaggatcttcca
ggtgccccaaccctgctgcggcccgagtccacgtcggtcatccgggccctgaagcaggac
ctggtgcagccgtgggggctggcacctcccggggcgcccccgccgcccctgctccacgcc
ggcttcctggccccggtggtgcgcggcctgtgcacgccgggcgccatccgctacggcccc
accgagctggggctcatgtacccccacctgcagcgaccgggcccgggcctccccgaggcc
ttctacccggccctggccctgccctacgccgggccgccaggcaccagggcaccgcgcaag
ggggactga
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