KEGG   Suncus etruscus (white-toothed pygmy shrew): 126029411
Entry
126029411         CDS       T09902                                 
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:setr04990]
    126029411 (NWD1)
Domain-containing proteins not elsewhere classified [BR:setr04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   126029411 (NWD1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 AAA_16 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 NACHT Beta-prop_RIG_2nd Beta-prop_IFT140_1st AAA_22 Beta-prop_Nup120_160 WD40_MABP1-WDR62_2nd Nucleoporin_N PEP5_VPS11_N NPHP3_N AAA Beta-prop_LRRK2 AAA_5 AAA_33 AFG1_ATPase AAA_28 Mg_chelatase ATPase_2 RNA_helicase AAA_18 RuvB_N AAA_24 AAA_25 AAA_19 NTPase_1 TniB nSTAND3 AAA_17
Other DBs
NCBI-GeneID: 126029411
NCBI-ProteinID: XP_049643636
LinkDB
Position
15:complement(92577322..92608825)
AA seq 1564 aa
MEAERETLHSSACPEVRTFCQKQGLMFEVVDLHWGVRSAEAAELMTPELCQEELERCQQT
SRGPSFVALLGNQYGPCPLPRLIEEKEWEVLRAQLAARPRDLELLARHFRKDENAVPPTF
LLQAPAGGEPRSPEEPGLGSVLCAAAQDALQQGLISLEQCGRFQCSAMEQELELGALGAE
GEQGATVFLREIQDLQRHLLDDCALRLVDRLPDGCLDEEAQERLGRLKERLATACPGALK
AHQLPWSRDLVNPKNKAHGRYLRELGEQFVARTNHQVLERLREAEQAAAAQPEFAWLFQE
IRQHLALGAEATRAFCGRQDLLAQLGQWLRLHQEVPHPPLLLWGPPGVGKTTLMSRLAEQ
VPAMLGPKTVTVLRLLGTTGLSREAGALLRGLTCQVCLAFGLPPPPAQVLGARARLVSFF
HALLHTVSGRRFESLVILLDSLDDVDGGGWAHRGLWLPAQCPPRVHLILSACSGPRGALD
AALRKLPGADSWEVPPLPAQQAQELVHRLLTAARRTLSPRQRDVLWASLPECGHPGRLRL
AFEEARSWASFTVPAPLAATPEEATHQLCARLEQTHGRLLVAAVLGYLAAARHGLSEPEL
KDVLSLDDEVLQAVYRDWTPPSRELLRFPPLLWVRLRRDLGHCLARRPVDGFMLLGIAQR
QLAEVVQARYLSGPERAKRHGVLADFFSGTWSQGTKKLITLPLLGKPLNLDRKVAEQPLW
FSDSVPNMRKLQELPLHLLGAGRVQELKQEVLGSMSWICCRGISGGLEALLDDFALCASS
LDCPEVDLIHGALQMCRPAAELRGLDKTLLYTELLARLLYFAPSHPALVGPLCQEAQSWF
RHCTDPTLVPLAGFLQPPGDPLQATLTGCHKGIIAAAWSLEQRRLVLGTQDGTIAVWDTE
DWQTVHILTGHTGQVKALRVLAGGSLAISASRDHTLRLWDLLSGQERFTLQDGGSQDAAE
PQACSLHVDEPRRVLYSVSGCTVSAWNLASAELLFRITGDARDPWVCAALLPARSTLLAV
SAGRLVSLWDSASGGRQGSRPLSSVTDEEPTCAVALPGRGVLAVGLSQGTLSLVSPDQDK
LLEKLPEAATFLVVSEDNSLLGAAFGRSVRVFLADSQGFRHFMATDLSHEDTVGAAAFGP
QNNLLVTGSQDGLIQVWSLSEQGALLAVLEGVGAAVSLLAIGGTLVAAASHQSSTVKVWD
LSCTPLPGPCAPFPDRTGLTAVSHNGAFVYFPKVGDRNKVTIWDVAEGAEQDAVDTSSEV
SCLEVAERTKLLLAGLVSGVVLVFPLLSRHDVLCIPPPEARRAVRCVALSRDERRLAIAY
DHTVLVLDVSPGEPFAVIDGPVYTFYTQLPEPLVRAAVLADSRVLYGLGDGGLYLYECAS
ARVAALDTLGGGRATCLELSHGEQLAVSGSEESRLFLWDLQACVCALELGYSSPYCRGVQ
CACFSQDDKYVFAGLKDRSVIVWSVRDGSLLAVQFVHAVVNRIVPTSNGFIAPSRHGRLV
RLRFQCPAARVAQDPLRNFKKAAWKVKWRQREELAAGEGGSQDAEGPKDTETKGHRRSQV
CLLL
NT seq 4695 nt   +upstreamnt  +downstreamnt
atggaggcagagagggaaaccctgcacagcagcgcctgccctgaggtgcgaaccttctgc
cagaagcaagggctgatgtttgaggtcgtggacctgcactggggggtccgaagtgccgag
gccgctgagctcatgacccctgagctctgccaggaagagcttgaacgctgccagcagact
tctcggggcccctcctttgtggcactgctggggaaccagtatgggccctgcccgctgcct
agactcatcgaagaaaaggagtgggaggtgctgagggcgcagctggcagcccggccccga
gacctggagctgctggcccggcacttccgcaaggacgagaacgcggtgccccccaccttc
ctgctgcaggcacccgccgggggtgagccccgcagccccgaggagccgggtctgggctct
gtgctgtgtgctgcggcccaggacgcgctccagcagggcctcatatccttggagcagtgt
ggacgcttccagtgctcagccatggagcaggagctggagctgggcgcgctgggcgcggag
ggcgagcagggggccaccgtgttcctgcgggagatccaggacctgcagcggcacctcctg
gacgactgtgccctgcgcctggtggaccggctgcccgacggctgcctggacgaggaggcg
caggagcgcctgggccgcctcaaggagcgcctggccaccgcgtgcccgggcgcgctcaag
gcgcaccagctgccctggagccgagacctggtcaaccccaagaacaaggcccacggccgc
tacctgcgggagctgggggagcagttcgtggccaggaccaaccaccaggtgctggagcgg
ctgcgggaggccgagcaggccgcggcggcccagcccgagtttgcctggctcttccaggag
atccgccagcacctggcactgggcgccgaggccacccgcgccttctgcggccgccaggac
ctgctggcacagctgggccagtggctgcggctgcatcaggaggtcccgcaccccccgctt
ctgctctggggacccccgggcgtgggcaagacgacactgatgagccgcttggccgagcag
gtccctgccatgctgggccccaagacggtgacggtgctgcggctcctgggcaccacgggg
ctgagccgtgaggccggtgcgctcctgcgaggcctcacctgccaggtgtgcctggccttt
gggctgcccccgcctcccgcccaggtgctgggcgcccgggcgcgcctggtgtccttcttc
catgcgctcctgcacactgtgtctggccgccgcttcgagtccctcgtcatcctgctggac
tcgctggacgatgtggacggaggaggctgggcgcaccgcgggctctggctgccggcccag
tgccccccgcgtgtccacctcatcctttcggcctgctcgggccctcggggggccctggac
gccgccctccgcaagctgcccggcgccgacagctgggaggtgcccccgctgcccgcccag
caggcccaggagctggtgcacaggctgctgacagccgccaggcgcacgctgagcccccgg
cagagggacgtgctgtgggccagcctgcccgagtgcggccaccctgggcggctacggctg
gccttcgaggaggcccggtcctgggcgtccttcacggtgcccgcacccttggcagccacg
cccgaggaggccacgcaccaactgtgcgcgcgactggagcagacccacgggcggttgctg
gtggccgctgtgctgggctacctggccgctgccaggcacgggctgtcagagccagagctg
aaggatgtcctgtccctggacgatgaggtcctgcaggctgtgtaccgggactggacgccg
cccagccgggagctgctgcgcttcccgccgctgctgtgggtgcgtctgcgccgggacctg
ggccactgcctggcgaggcggcctgtggacggtttcatgctgctgggcatcgcccagagg
cagctggctgaggtggtccaagcacgctacctgtcggggcctgagcgggccaagaggcac
ggggtgctggcggacttcttctcggggacctggagccagggcaccaagaagctcatcacg
ctgccactgctggggaagccgcttaacctggaccgcaaggtggccgagcagccactgtgg
ttctcagactcggtgcccaacatgcgtaagctacaggaactgccgctgcatctgctcggc
gctggccgtgtccaggaactgaagcaggaggttctgggcagcatgagctggatctgctgc
cgtggcatatcggggggtctggaggcgttgctggatgactttgccctgtgcgcatccagc
ctggactgcccggaggtagacctgatccacggtgccctccagatgtgccgcccagctgcc
gagctccggggcctagacaaaactctcctgtacacggagctcctggcccggctgctgtac
tttgcgcccagtcacccggccctcgtggggccactgtgccaggaagcacagagctggttc
cgccactgcacagaccccaccctggtgcctctcgctggcttcctccagccccccggggat
cccctccaggccaccctcacgggctgtcacaaaggcatcattgctgcggcgtggagcctg
gagcagcggcggctggtgctgggcacccaggatggcactatagccgtgtgggacaccgag
gactggcagacggtccacatcctgactggacacacaggtcaggtgaaggcattgagagtg
ttggccgggggcagcctcgccatctccgcatcccgagaccacacactgcgcctctgggat
ctgctgtcggggcaggagagattcactctgcaggatggtggctcccaggatgcggccgag
cctcaggcttgcagcctgcatgtggacgaaccccggcgagtgctgtactctgtgtctggc
tgcacggtcagtgcctggaacctggcatcggctgagctgctgttccggatcacaggggat
gccagggacccctgggtgtgcgcagccctcctgcctgccaggtccacactgctggctgtg
tctgcgggccgcctagtcagtttgtgggactcggcctcgggagggcggcagggctcacgg
ccactgtccagtgtcacagacgaagagcccacatgcgcggtggcactgcccggaaggggc
gtattggctgtggggctcagccagggcaccctcagcctggtctcccctgaccaggacaag
ctgctggagaagcttccggaagcggcgacattcctggtggtctctgaagacaactccctc
ctcggggcagcctttggcaggtccgtgcgcgtcttcttggctgactcccagggcttccgc
cacttcatggccacggacctgagccacgaagacacagtgggggctgccgccttcgggccc
cagaacaacctgctggtcacggggtcccaagatgggctcattcaggtgtggagcctgtcg
gagcagggggcgctgctggccgtgctggagggtgtcggggcggccgtgagcctgctggcc
ataggcgggactctggtggctgcggcctcgcatcagtcatccaccgtgaaggtctgggac
ctcagctgcacaccactgcccgggccttgtgcacccttcccggacaggacggggctcacg
gctgtgtcccacaacggagcctttgtctatttccccaaagtcggggacaggaacaaagtc
accatctgggacgtggctgaaggcgcagagcaagacgctgtggacacgtccagcgaggtg
tcctgcctggaggtggcggagcggacgaagctgctgctggcggggctggtgtcgggcgtg
gtgctggtcttcccgctgctgtcccgccacgacgtgctgtgcatcccgccgcccgaggcc
cggcgtgcggtgcgctgcgtggccctgagcagggacgagaggcgcctggccatcgcctac
gaccacacggtgctggtgctggacgtgagcccgggcgagccgttcgccgtcatcgacggc
cccgtctacaccttctacacgcagctgcccgagccgctggtgcgagccgcggtgctggcc
gacagccgcgtgctctacggcctgggcgacggcggcctctacctctacgagtgtgccagc
gcccgggtggccgcgctggacacgctcgggggcggccgggccacctgcctggagctcagc
cacggcgagcagctggcggtcagcgggtccgaggagtcgcggctgttcctgtgggacctg
caggcctgcgtgtgtgccctggagctcggctactcgagcccctactgcaggggcgtgcaa
tgtgcctgcttctcccaggacgacaagtacgtctttgccggcctcaaggaccgctctgtc
atcgtgtggagcgtgcgggatggctccctcctggccgtgcagttcgtccacgccgtggtg
aaccgcatcgtgcccacgtccaatggcttcatcgcgcccagcagacacggccgcctggtc
cgccttcgcttccagtgcccggccgcccgcgtggcgcaggacccgctcaggaacttcaag
aaggccgcgtggaaagtcaagtggaggcagcgggaggagctggcggctggtgagggtggc
tcgcaggacgctgagggccccaaggacaccgagaccaagggccaccgtcgctcccaggtc
tgcctgctgctgtga

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