Suncus etruscus (white-toothed pygmy shrew): 126029464
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Entry
126029464 CDS
T09902
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126029464 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
126029464 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126029464 (LSM4)
03041 Spliceosome [BR:
setr03041
]
126029464 (LSM4)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126029464 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
126029464 (LSM4)
Spliceosome [BR:
setr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126029464 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
126029464
NCBI-ProteinID:
XP_049643698
LinkDB
All DBs
Position
15:92031389..92034540
Genome browser
AA seq
144 aa
AA seq
DB search
MSRGAMLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWR
MPECYIRGSTIKYLRIPDEIIDMVKEEAVAKGRGRGGLQQQKQQKGRGLGGTGRGVFGGR
GRGGLSGPGRGQPEKKPGRPTGKQ
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcggcgccatgcttcccctttcgctgctgaagacggcgcagaaccaccccatg
ttggtggagcttaaaaacggggagacgtacaacgggcacctggtgagctgtgacaactgg
atgaacatcaacctccgagaggtcatctgcacatccagggatggggataagttctggcgc
atgccggagtgctacatccgaggcagcaccatcaaatacctgcgcatccctgacgagatc
atcgacatggtcaaggaggaggcagtggccaagggccggggtcgcggaggtctccagcag
cagaagcagcagaaggggcgcggcctgggcggcactgggcgaggtgtgtttggcggtcgt
ggccggggtgggctctctggccctggacgagggcagccagagaagaagccagggcgccca
acgggcaagcagtga
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