Suncus etruscus (white-toothed pygmy shrew): 126029586
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Entry
126029586 CDS
T09902
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50-like
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126029586
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126029586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
TRIM_CC
zf-Nse
U-box
Sina_RING
DUF7960
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
126029586
NCBI-ProteinID:
XP_049643835
LinkDB
All DBs
Position
15:73280473..73283171
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AA seq
252 aa
AA seq
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MAWQVSVYELEARLQCPICLEVFAEPLMLQCGHSYCRTCLLALSCRSGPELRCPVCRQVV
DGSSSSPNVSLARVIEALRWPRELEPEPKVCPRHWNPLSLFCEKDQELICGLCGLLGPHQ
QHRVTPVSTAYSRMKEELAALLCHLKQEQKEVEQLIARLVNNRTRVVNESDVFSWVIRRE
FQELQHLIDEEKARCLGGVEAHTRGLLASLDSQLERAQATRERLGQAERALEQFSNEGHH
EFIRKYHSLASR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagcgtgtacgagctggaggcacggctgcagtgcccaatctgtctg
gaggtctttgccgagccactgatgctgcagtgcggccactcctactgccggacctgcctg
ctggccctgtcctgccgctcgggccccgagctgcgctgccccgtgtgtcggcaggtggta
gacggcagcagctcctcgcccaacgtctcactggcacgggttatcgaggcactgcggtgg
ccccgggagctggagccagagcccaaagtctgcccccgccactggaatccactcagcctc
ttctgtgagaaggaccaggagctcatctgtggcctctgtggcctgctggggccccaccag
cagcaccgtgttacgcctgtgtccacggcttatagccgcatgaaggaggaactggctgcg
ctgctttgccacctgaagcaggaacagaaggaagtggagcagctcatcgccaggctggtg
aacaacaggacaagagtcgtgaatgaatctgacgtgttcagctgggtgatccggcgggag
ttccaggagctgcagcacctgatagacgaggagaaggcacgctgcctcggtggggtggag
gcccatacccgaggcttgttggcctccctcgactcacagctagagcgtgcgcaggccacg
agggagcggctgggccaggctgagcgggcactggagcagttcagtaatgaaggccaccac
gagttcatccggaagtaccactcgttggcctccaggtaa
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