KEGG   Suncus etruscus (white-toothed pygmy shrew): 126029642
Entry
126029642         CDS       T09902                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03020  RNA polymerase
setr03420  Nucleotide excision repair
setr04623  Cytosolic DNA-sensing pathway
setr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126029642 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    126029642 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    126029642 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:setr03021]
    126029642 (POLR2E)
   03400 DNA repair and recombination proteins [BR:setr03400]
    126029642 (POLR2E)
Transcription machinery [BR:setr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     126029642 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     126029642 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     126029642 (POLR2E)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126029642 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 126029642
NCBI-ProteinID: XP_049643908
LinkDB
Position
15:complement(82966550..83106867)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGRVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctatggaagatccgcaagaccatcatgcagctg
tgccatgaccgtggctacctggtgacccaggacgagctggaccagacgctggatgaattc
aaggcgcagtttggggacaagccgagtgaggggcgcccgcggcgcacggacctcacagtg
ttggtggctcacaacgacgaccccacggaccagatgttcgtcttcttcccagaggagccc
aaggtgggtatcaagaccatcaaggtttattgccaacgcatgcaggaggagaacatcacc
cgagcactcatcgtggtccagcagggcatgacgccctcagccaagcagtccctggttgac
atggccccaaagtacgtcctggagcagtttctgcagcaggagctgcttatcaacatcacg
gagcacgagctggttcctgagcacgtggtcatgaccaaggaggaggtgacggagctgctg
gcccgatataagctccgggagaaccagctgccaaggatccaggctggggaccctgtggcg
cgctacttcgggataaagcggggacgggtggtgaagatcatccggcccagcgagacggct
ggcaggtacatcacctaccgcctcgtccagtag

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