KEGG   Suncus etruscus (white-toothed pygmy shrew): 126029736
Entry
126029736         CDS       T09902                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:setr03036]
    126029736 (KDM4B)
Enzymes [BR:setr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     126029736 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     126029736 (KDM4B)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    126029736 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 126029736
NCBI-ProteinID: XP_049643999
LinkDB
Position
15:complement(87987884..88021185)
AA seq 1121 aa
MGSEDPGAQNPSCKIMTFRPSLEEFKDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGKDQPALDHTRPTALSSPELSSWSA
SRASLKAKLLRRQVSVKERHWRKAEDDRRPGLDRKREPSRKPGFQSHRKRNQPKKSKPED
SKSAEEGSAPAAIQEEVGVGLKEAVPPEVEPEEEDEPPVLAQARDPESAEEDDRGKARPP
KAKGDRKKKGLNPLHTHSPPAPAPSSSREAPRPEPPSPAAPSDSPTAAPLNVVPPEAPGE
EQEARPRPIIPMLYVLPRPGPFPGDKGRVSCSPPTEPPGHKEPAWKASVGPMELGAPEDG
GAPDRQAPPLTPQLKVEVKKSRRHPLGRPPTRSPLSVVKQEASSDEEALAFPGEEDASDP
VALRALLDLAWGDQAARFQAERSFNEAAALREPHCAVCALFYPYSQSLQMEKEAPPAPAG
DTPAAPPSRRGQKTQPLIPEICFTSGGSTGSTEPLPGTAAIGEDGASLLIACAKCCLQVH
ASCYGVRPELLSDDWTCSRCAAHAWTVECCLCNLRGGALQVTTDGRWIHVICAIAVPEVR
FVNVTERHPVDISAIPEQRWKLKCVYCRKWTKKVSGACIQCSCEHCSTSFHVTCAHAAGV
LMEPDDWPYVVSITCRKHKAAAHSAQSLRAVSLGQVVITKNRNGLYYRCLVIGSTAQTFY
EVNFEDGSYSDNLYPESITSRDCARLGPPAEGELVELRWADGNLYRARFIAAAANVLYQV
EFEDGSQLTVKRGDIFTLDEELPKRVRSRLSLSTGAPQDGLFAGEEVKAAKRPRVGTPTS
TTPTSTSRAPEVLGPSPDYLAFMENLLQAQAQAQARPGPPF
NT seq 3366 nt   +upstreamnt  +downstreamnt
atggggtcggaagatcctggggcccagaaccccagctgcaagatcatgacgttccggccc
tcgctggaggagttcaaggacttcaacagatacgtggcctacatcgagtcccagggcgcc
caccgcgctggcctggccaagatcattcctccaaaggagtggaagcctcggcagacgtac
gatgacatcgacgacgtggtcatcccggcgcccatccagcaggtggtgacgggccagtcg
ggcctgttcacacagtacaacatccagaagaaggcaatgaccgtgggcgagtaccggcgt
ctggccaacagcgaaaaatactgcactccacggcaccaggactttgacgacctggagcgc
aagtactggaagaacctcaccttcgtgtcccccatctacggggccgacatcagcggctct
ttgtatgacgatgacgtggcgcagtggaacattgggaacctgcggaccatcctggacatg
gtggagcgtgagtgcggcaccatcatcgagggcgtgaacacgccctacctctacttcggc
atgtggaagaccacattcgcctggcacacggaggacatggacctctacagcatcaactac
ctgcactttggggagcccaagtcctggtatgccatccccccagagcatggcaagcgcctg
gagcgactcgctatcggcttcttccccgggagctcccagggctgtgacgccttcttgcgc
cacaagatgaccctcatctcacccatcatcctcaagaagtatgggatccccttcagccgg
atcacgcaggaagcgggcgagttcatgatcacctttccctacggctaccatgctggcttc
aaccacggcttcaactgtgctgagtccaccaacttcgccaccctgcgctggatcgactac
ggcaaagtggccacgcagtgcacgtgccgcaaggacatggtgaagatctccatggacgtg
ttcgtgcgcatcctacagcctgagcgctacgagcagtggaagcagggcaaggaccagccg
gcactggaccacacgcgccccacagcactcagcagccccgagctcagctcctggagtgcc
tcccgtgcctcgcttaaggccaagctcctccgcagacaggtgagtgtgaaggagagacac
tggcggaaggccgaggacgacagacggccaggcctagacaggaagagagagcccagcagg
aagccggggttccagtctcatcggaagcggaaccagcccaagaagtccaaacctgaagac
tccaagtctgcagaggagggctcggccccggcagccatccaggaggaggtgggtgtcggc
ctgaaagaggcggtgccccctgaggtggagcccgaggaggaagacgagcccccggttctg
gcccaggcccgggaccctgagagtgcagaggaggacgacaggggcaaggcgcgacccccc
aaagccaagggcgaccggaagaaaaagggcctgaaccccctgcacacacactccccgccc
gcacctgccccctcctccagcagggaggcccctcggcccgagcccccaagccccgccgcc
cccagcgacagccccacggccgcccccctcaacgtggtgccacccgaggccccaggagag
gagcaggaggcacgaccacgccccatcataccgatgctgtacgtgctgccgaggcccggg
ccatttcccggggacaagggccgtgtgtcctgctcgccacccacggagccgcctggccac
aaggagcccgcctggaaggcgtccgtggggcccatggagctgggggcgcctgaggacggc
ggggcccctgatcgtcaggcaccacccctgactccccagctgaaggtggaggtgaagaag
agccggcgccaccccttgggcaggccccctacccgctcgccgctgtctgtagtcaagcag
gaggcatccagcgacgaggaagctctggccttccccggggaggaggatgcaagcgatcct
gtggccctgcgggcgctattggacctggcatggggggaccaggccgcccgcttccaagcc
gagcgcagtttcaatgaggccgctgccctgagggagccgcactgtgccgtgtgcgccctc
ttctacccctacagccagtccttgcagatggaaaaggaggcccctccggcccctgctggc
gacaccccagctgcacccccctccaggaggggccagaagacgcaaccgctgatccctgag
atctgtttcacgtcgggtgggagcacagggagcaccgagccactgccgggcaccgcggcc
attggggaagacggcgccagtctgctcatcgcctgcgccaagtgctgcctgcaggtccac
gccagttgctacggtgtccggccggaactgcttagcgacgattggacatgctcccgctgt
gccgcacacgcctggactgtggagtgctgcctgtgcaacctcaggggaggcgccctacag
gtgaccacggacgggaggtggattcatgtgatctgcgccattgccgtcccggaagttcgg
ttcgtgaacgtgacagaacgccaccctgtggacatcagcgccattcccgagcagcgttgg
aagctgaaatgcgtgtattgccggaagtggacgaagaaggtgtcgggtgcctgcatccag
tgctcctgcgaacactgctccacctccttccacgtgacctgcgcgcacgccgcaggggtc
ctcatggagcctgacgactggccctacgtggtgtccatcacttgccgcaaacacaaggcg
gccgcccacagtgcgcagtccctgcgggccgtgtccctgggccaggtggtcatcaccaag
aaccgcaacgggctctactaccgctgcctcgtcattggcagcactgcccagaccttctac
gaggtcaacttcgaggacggctcctacagcgacaacctgtaccccgagagcataaccagc
agagactgtgcccgcctggggcccccggccgaaggggagctagtggagctgcgctgggcc
gacggcaacttgtaccgggccaggttcatagctgctgctgctaatgtcctctaccaggtg
gagtttgaggacgggtcccagctgacggtgaagcggggtgacatcttcacgctggatgag
gagctccccaagagggtgcggtcgcggctgtcgctgagcaccggagcgccccaggacggc
ctcttcgcgggggaagaggtgaaggcagcgaagcggccacgggtcggtaccccgacctcc
actaccccgacctccacctcgcgtgcccctgaggtgctggggcccagtccggactacctg
gccttcatggagaacctgctgcaggcgcaggcgcaggcccaggcccggcccgggcccccc
ttctag

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