Suncus etruscus (white-toothed pygmy shrew): 126029857
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Entry
126029857 CDS
T09902
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126029857 (TMC5)
03037 Cilium and associated proteins [BR:
setr03037
]
126029857 (TMC5)
Transporters [BR:
setr02000
]
Other transporters
Pores ion channels [TC:
1
]
126029857 (TMC5)
Cilium and associated proteins [BR:
setr03037
]
Other cilia and associated proteins
Stereociliary proteins
126029857 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
126029857
NCBI-ProteinID:
XP_049644070
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All DBs
Position
15:56348578..56377463
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AA seq
730 aa
AA seq
DB search
MLTDDQVDEIIVEVEHVASGHHLSSHQLIPRKQSKSHFSTITFKSDMNEASSWIFSDLND
VKDSSELSVVVDSPWMSHESVRVQKLIATLAPMTLRERNKAIRSQPRTMEEKRILRKMVD
KEKNKQPHRCLEFGCCSQCLNSISQACRRSKNSLSELLGAVSLWQKTFKVIGGKFGTSVL
SYFNFLQWLWKFNVFFFIVILGFLIIPQLTVAEKNNLPFTGLEFFTGSGYFNDTVMYYGF
YTNSTIYHGKGPSYNMQLAYLFTIGGCLVVCFFSLLLSMAKYFRKNFINPHLYSRGIAKL
IFCWDFTVTHDKAVKLKQKNLSTEIRENLSEIRQEKVKLTLSQQLIRLSAHLAAWFVSTG
VAGACCVAVYYLAENNLEFLQNHRDPGAVLLLPFVVSCINLAVPRFYSMFRLVEHYEMPR
HEVYSLLIRNILLKISIIGILCYYWLNVVALSDQKCWETLIGQEIYRLLLMDFVFSIIDS
LLGEFLRRIIGTHFVSLGSQEFDIARNVLELIYAQTLVWTGTFFCPLLPFIQMITLFIMF
YVKNVSLMMNFPPPSRAWRASQMMTVFIFLLFFPSFTGVLCTLAITVWRLKPSAGCGPFQ
GLPSIIHSIYSWIDTLSTRPSYLWVVWIYRNLIGSVHFFFILTLIVLIITYLYWQITEGR
KVMIRLLHEQIVNEGKDKLFLIEKLTKLQDAEKRADPSLGQMKRRDVKVRPGSATLKCYD
PDLPLWVQCH
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgatgaccaagtggatgaaatcattgtggaggtggaacatgtggcctctggg
caccatctgtccagccaccagctcattcccagaaagcagtccaaatctcattttagcacc
atcacattcaagtctgacatgaacgaggccagctcctggattttcagtgacctgaatgac
gtcaaggattcttcagaacttagtgtggttgtagactctccttggatgtcccatgaaagc
gttcgagtccaaaagttaatcgccacactggcccccatgactttgagagagagaaataaa
gccattaggagtcagccaaggaccatggaagagaagaggatcctgaggaaaatggttgac
aaggagaaaaacaagcagccccatcgctgccttgagtttggctgctgctcgcagtgcctg
aactccatctcccaggcgtgccggagatccaagaacagcctttcggagctgctgggagct
gtcagcctgtggcagaagacgttcaaagtcatcgggggcaagtttgggaccagtgttttg
tcctacttcaacttcctgcagtggctgtggaagttcaacgttttcttcttcattgtgatc
cttggcttcctcatcatcccgcagcttactgtggctgagaagaacaaccttcccttcaca
gggcttgagtttttcacagggtcgggttattttaatgacactgtaatgtattatggcttt
tacaccaattccacaatttatcatggaaaaggcccatcctacaacatgcagctggcttat
ctcttcaccattggagggtgtctggtggtctgcttcttcagcctgctcctcagcatggct
aagtatttccggaaaaacttcatcaacccccacctttactccagaggcattgctaaactg
attttttgctgggacttcactgtcactcatgacaaagcagtaaagctcaagcagaagaat
cttagcacggagataagggagaatctgtcagaaatccgccaggagaaagtcaagttaacc
ctcagccagcagctcattcgcttgtctgctcacctggcagcctggtttgtgtccacggga
gtggccggggcttgctgtgtggccgtttattacctggccgagaacaacttggagtttctg
cagaatcacagggaccccggggcagtactgttactgccctttgtggtctcctgcatcaac
ctggctgtgccacgcttctactccatgttccggctggtggagcactacgagatgccaagg
catgaggtctatagcctcctgattaggaacatcctcctgaaaatctcaattattggtatt
ctctgttactattggctcaatgtggtggctctgtctgaccagaagtgctgggaaaccctc
attggccaggaaatctaccggctccttctgatggactttgtgttctctatcattgattct
ctgctaggagagtttctcaggcggatcattgggactcactttgtgagtttgggctcacag
gagtttgacatcgccaggaatgtcctggagctcatctatgcacagacactggtgtggacc
ggaaccttcttctgtcctttactaccctttatccaaatgatcactcttttcatcatgttt
tacgtcaaaaatgttagcctgatgatgaacttcccaccacccagcagagcctggcgggcc
tcgcaaatgatgacggtcttcatcttcctactcttcttcccatccttcactggagtcctc
tgtaccttggccatcactgtctggaggttgaagccttcagctggctgtggccccttccaa
ggcctgccctccatcatccactccatctatagctggatcgacaccctgagcaccaggcca
agctacctgtgggtggtctggatctaccgcaacctcatcggcagtgtgcatttcttcttt
attctcaccctcatcgtgctaatcatcacctatctgtactggcagatcactgagggaagg
aaggtcatgatccggctgctccatgaacagattgtcaatgagggcaaagacaagctgttc
ctgattgaaaagttgaccaagttgcaagatgcagagaagagagctgaccccagcttgggt
cagatgaagaggagagatgtgaaggtgaggcctggttctgccaccctgaagtgctatgac
ccagacttacctctgtgggtccagtgccactaa
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