Suncus etruscus (white-toothed pygmy shrew): 126029907
Help
Entry
126029907 CDS
T09902
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126029907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126029907
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126029907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_23
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-GeneID:
126029907
NCBI-ProteinID:
XP_049644105
LinkDB
All DBs
Position
15:64911947..65025636
Genome browser
AA seq
1684 aa
AA seq
DB search
MEVSVVHKFMILLWKNFTLKKRQFIAIATEIFITFILGSTVWLVRTASDIRTYGPFIYGS
FSHDTLPYNFPRSSSLGNWQLAFVPSTSQVVSNIIENVKSDLQYDFDVKGFASEKSFERY
IHDEENYEKVLAAIIFDHEFKNTSDPLPQEVKCYLRFSSFQRNVNMGFIRIGGWKTDSLY
PEYSQPGPRHALSSDGGSPGYFSEGFLAVQHALANSITRYHASQHPDALFTKTKINVISQ
RFPYKRYNHDYFFAYATIFIPLIVLFIFSINYLILVKSIVWEKQNRLKEYQLMIGLSNWM
LWAAYFVTFLIVYLINIILICIIFFFKVDPKPIFLYSDASLVFVFLLCFAFATIFFSFMI
STFFSKVYFAVSIGGFFYIAFYFPTPLVTEKLTELSVFQTLLFCLSSNVAMAVGARFIVK
SEKEEIGIRWSNLFEPLRSEKFHFGYVLGMLLFDGFLYGLVTWYIEAVFPGEYGMPKPWY
FFVQPSYWCGKNPKKCTQRKEFEDIAKTQFFEDEPTNLTAGIQIKNLWKEYPMRNTTKIA
VKNLNLNLYEGQITVLLGSNGAGKSSTLSILSGLYPATYGEVYINGYNVSEEIVEIRKSL
GLCPQQNLLFNHLTVSEQLYFYCVLKGVPGNIRSTEIDQMLTTFHLLEKRNVYSSLLTGG
MKRKVSIIIALIGGSKVVILDEPTSGMDPASRRSTWDLLNHYKQNRTILLTTHYMDEADA
LGDRIAIMVHGSLKCCGSSIFLKNIYGEGYHLVMVKESHCNVEDICDLIYDEIPTATLEN
NTRNELSFILPKEYIHRYEDLFTALENRKEELGIAGFGAYITTMEEVFLSANRREKLEIV
AKVTPSQAPYMMSQVSIKHESRIMSRIEMPNISSMNESPATKFNTGCSLYCQQFVAMFFK
KVLFNWRNWKLLVIQMVAVLGCPIFLLEAERLSSQSVDVDARELNLKEYGQTIVPLSLSG
SFDFNIFIKAFETVLQLNNQKLVLVKGNFMKYLVENKDCIYTCITAVDINGNDTAIQVTS
LFNNDAIHSPAVSLGLIENVFLLMTSNASLRLFNKPQPYIDKKANKGMTSGLHATLYIHF
GLALLMSGFCLLSVTERLSNAKHIQFMTGLSVLVYWLSSLLWDIIIFIFICCWLMVVLRY
FHLVVYTSNYRFLDTMLIFIIYGWSSIPLMYLMGFLYNRTGNAYAMLAVFNYISGIFTTL
VDHVFQSDIQRGISNSTKNFILKGLIIFPNFNLGKCLRNYFDFYHNRLLCSVKHPPDHLN
CKELSEDYFIYSLKEKMIGRYLMRMILTGFICLILIIFLETTLWRIKTFFNQNIAFSLYK
IFRQKNMSQELYTETEDEDVQNERIKIMTMTPESLNSTVLIKELIKIYFKYPLVIAAKNI
SLEIQKGECFGVVGYTGAGKTTLFKILTEEETVTSGDVFIDGSNITKNTKRVKSKVGYCP
QFDALLDYMTAREILIMYARLWGIPEHSISEHVTRSLCSLQLETHADKIIKTYSGGNKRR
LSTAIAMMGNPSVILMDEPSTCMDPLARHLLWNVVTQARESGKVIVISSHSMEECDAICT
KLAILVQGKIVCLGSPQHLKNKFGNIYIVKVKVKSEAREQKMNEFKIFIETEFPGSELKQ
ETQGIVNYYIPSKDISWGKIFGILEEAKDQYHLEDYSISQMTLEQIFLIFAVPETPEEKR
KLSV
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttctgttgtacacaaatttatgatacttctctggaagaattttactttaaaa
aagcggcaatttattgctatagctacagaaatcttcattacatttatacttgggagcaca
gtttggctagtacggacagcaagtgatataagaacttacggacctttcatttatggttct
ttcagccatgacactttgccttataactttccacgaagctcttccttaggaaattggcaa
ttggcgtttgtgccttctactagtcaagtggtgtcgaacattattgaaaatgtgaaaagt
gacttacaatatgattttgatgttaaaggttttgcttcagaaaaatcttttgaaagatat
attcatgatgaagaaaactatgaaaaagtgcttgctgctataatttttgaccatgagttc
aaaaataccagtgatcccctaccacaggaggtgaaatgttatctgcgctttagtagtttt
cagagaaatgtgaatatgggtttcattcgcattggaggctggaaaacagatagtctttat
ccagaatattcacagccaggacccagacatgctttgtcttccgatggagggtctccagga
tacttctctgaagggttcctggctgtacaacacgctctggctaactccatcactagatac
catgcctctcaacatccggatgctctgtttacaaagacgaagatcaatgtgatttctcag
agatttccatacaaaagatataaccatgattatttctttgcatatgctacgatatttatc
cctttgatagtattatttatcttctctataaattaccttatccttgttaaatccattgtg
tgggaaaagcaaaatcgattgaaggagtaccaacttatgataggactcagtaattggatg
ctttgggctgcttatttcgttacattcctgattgtgtacttaattaacattattttaatt
tgcataattttcttttttaaggttgatccaaagccaatcttcctatacagtgatgcatct
ctggtctttgtctttttgctatgttttgcttttgctacaatattcttcagtttcatgatt
agtacattcttcagtaaagtatattttgctgtcagtattggaggtttcttttatattgcc
ttctactttccaactcctttagtcactgaaaaattgacagaactgtcagtcttccagacg
ctgttattctgtcttagctcaaatgttgcaatggcagtgggagccagattcatagtaaag
tcagaaaaagaggaaataggaattagatggagcaacctctttgaaccactcagatctgag
aaatttcattttggttatgtactaggaatgttgttatttgatggtttcttgtatggcctt
gtgacctggtatatagaagctgtttttccaggagagtatggcatgccaaaaccttggtac
ttttttgtacagccttcttactggtgtggaaaaaatccaaagaagtgtacacagagaaaa
gaatttgaagatatagccaaaactcaattttttgaagatgaacctactaatttgacagca
ggaatacaaataaaaaatttgtggaaggaatatcctatgcgtaatactaccaaaatagct
gtaaaaaacctaaatttgaatttatatgaggggcagattactgttcttctaggaagcaat
ggagcaggaaaatcctctactctatccattctctcaggtctttatcctgctacttatgga
gaagtctacattaatggatataatgtctcagaagagatagttgagatcagaaaaagcttg
ggcttgtgtccacagcaaaatttattatttaatcacttgacagtatcagaacaactttat
ttctattgtgtgttaaaaggagtacctggaaatatcagatctacagaaattgaccaaatg
cttactactttccaccttctagaaaagcgtaatgtgtattcaagcttgctaactggagga
atgaaacgcaaggtctctataattatagcacttataggtggttccaaggtggtaatactt
gatgaaccaacatctggcatggacccagcctcaagacggtccacctgggatctcctcaat
cactataaacaaaatcgcaccattttactgacgacccattacatggacgaagctgatgcc
cttggtgaccgcattgccatcatggttcatggatctttgaagtgttgtggatcctccatt
ttcctgaaaaatatatatggtgaaggctaccacctagtcatggtgaaagaatcacactgt
aatgttgaagatatttgtgatttgatttatgatgaaataccaacagccaccttggagaat
aatactagaaatgaattgtcttttattctacccaaagaatacatccatagatatgaagat
ctttttactgctctggaaaatagaaaggaggaacttggcatagctggctttggtgcctat
attactaccatggaagaagtctttcttagtgccaatagaagagaaaaattagaaattgtt
gccaaagttacgccatctcaagctccctatatgatgagtcaagtttcaatcaaacatgag
agtaggattatgtccagaattgagatgccaaatatttctagcatgaatgaaagtcctgct
actaagtttaacactggatgttctctctactgtcagcagtttgtggctatgttcttcaag
aaggtgctgttcaattggcgcaactggaaactgcttgtgatacagatggtggcagttctg
ggttgccctatctttcttttagaggccgaaagattatcaagtcagagtgtggatgtagat
gctagagaattgaatctgaaagagtatggccaaactattgtgcctttaagtttgtctggg
agctttgactttaatatatttatcaaggcatttgaaacagttcttcagctcaacaaccaa
aagcttgtattagtgaaaggcaactttatgaagtacttggtagagaataaagattgtatt
tacacatgcattactgcagttgacataaatggaaatgatacggcaatacaagtgacttct
ctattcaacaatgatgcaattcattcacctgctgtttccctgggattgatagaaaatgtc
tttttgctgatgacttctaatgcttccttgagacttttcaataaacctcagccatacatt
gataaaaaggcaaacaaaggaatgacaagtggactccatgcgacattatatatacacttt
ggtctggctcttttgatgagtggtttttgtctgctgtcagtaactgagagactttctaat
gcaaagcacatacagtttatgactgggctttctgtccttgtgtattggctttcttctctg
ctgtgggatataataattttcatctttatctgctgctggctaatggtagtgttgagatac
ttccacttggttgtatataccagtaattaccgctttctagacacaatgttaatctttatt
atatatggttggtcttccattcccttaatgtacttgatgggcttcctctataatcggact
ggcaatgcctatgccatgcttgctgtatttaattacatttcaggcattttcactaccctc
gtagaccatgtatttcagagtgatattcaacgtggcatatcgaattccaccaaaaatttt
attcttaaaggactaataatctttccaaattttaaccttgggaaatgcttgagaaactat
tttgacttctaccacaatagattactgtgctcagtaaagcatcctcctgaccatttaaac
tgtaaagaattgagtgaggattattttatttattctcttaaagagaagatgattggaagg
tatctcatgagaatgattcttacaggctttatttgccttatattgatcatctttttggaa
actactttgtggaggataaaaacatttttcaatcaaaatattgcctttagtttatataag
atattcaggcagaaaaatatgtctcaagaattatatacagaaacagaagatgaagatgta
caaaatgaaagaataaaaattatgacaatgaccccagaatcactgaattcaacagtactt
ataaaagaactcataaagatatattttaaatatccacttgttattgctgcgaaaaatatc
tcccttgaaattcaaaagggagagtgctttggagtggtaggatacacaggagctggtaaa
actactttatttaaaattctgacagaagaggagactgttacatctggcgatgtgtttatt
gatggttctaacattactaaaaataccaaaagggtgaagtcaaaagttggctattgccct
caatttgatgccttgttggattatatgactgctcgggaaatattgatcatgtatgccaga
ttgtggggaatacctgagcatagtattagtgagcatgtaacaagaagtttgtgttctcta
caactagaaacccacgctgacaagattataaaaacatacagtggagggaacaaacgtaga
ctgagtacagctattgctatgatgggaaacccttcagtcattttgatggatgagccatca
acttgtatggatccccttgcccgacacctgctctggaatgtcgtgacacaagcacgtgag
agcggcaaggtcattgtgatatcttcccacagtatggaggaatgtgatgccatctgtacc
aaactggccatcttggtacaagggaagattgtgtgcttgggcagccctcagcatctcaag
aacaagtttggcaacatttacatagtgaaggtgaaggtcaagagtgaggcacgtgagcag
aaaatgaatgagtttaaaattttcattgagacagaatttccaggtagtgaattaaagcag
gaaactcaagggattgttaactactacattcccagcaaggacattagttggggaaagatc
tttggcattttggaggaagctaaagatcaataccatttagaagactattctatcagccag
atgacactggaacaaatatttctgatctttgctgtgccagagacacctgaggaaaagaga
aaactctctgtgtaa
DBGET
integrated database retrieval system
