Suncus etruscus (white-toothed pygmy shrew): 126030083
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Entry
126030083 CDS
T09902
Symbol
FBN3
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-3
KO
K23342
fibrillin 2/3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126030083 (FBN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126030083 (FBN3)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126030083 (FBN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_Tme5
Motif
Other DBs
NCBI-GeneID:
126030083
NCBI-ProteinID:
XP_049644239
LinkDB
All DBs
Position
15:complement(85987677..86025825)
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AA seq
1756 aa
AA seq
DB search
MGRARRGARGGLPFSSPHPQPALARFSSVSYGPGLLRVASLHFLLPASKVFVLQGPYLVW
NGALAMGQGPWAQLLMPWLALGYLVGAQGLWVGAPETSGPGRVRRRGGPPILQGPNVCGS
GFQSYCCPGWTTRPGGHLCVVPLCRHACSPGFCFQPNLCICANGHQAPSCGVSREVGCRV
SCLNGGSCRGDSCLCQKGYTGTLCGQPLCDHGCHNGGRCIGPNLCACVYGFLGPWCERDY
RSGPCFGQVGPWGCKHQLTGLTSTKTLCCATVGRAWGLPCEPCPAQPHPCHRGFLPNVHT
GACQDVDECVSLPGLCSGGLCTNTVGGYTCVCPPGFTSSQDGTRCLDHRAGICYLALIGG
RCVGPAALRYPRGSCCCERGRCWAAGSSPEPCPVPGSAEFQRLCPHQRSSPASAPGAAVP
GFGSTPQDPRGSEPAVPSLSLSGTHVDAAECQGGAPSPGSFHCRCPEGLVQGSNHPCTTN
QVPNQVPSQVARQVGSACYSGLDGTSCTRPFPGTFTRAQCCCASPEHHFGEPCEPCPAQN
SAEFQVLCPSSLGFSTDGRDIDECHLFPEICGPGTCRNTPGTFECHCPQGYKSSLAPRQQ
CVDVDECEVGGSLCEAHASCLNFPGSFRCRCQPGWIGDGLRCQDLDECTSHTHPCDPXGH
CLNTTGSYHCACQPGFLQNGFYHDRDECAEDRNLCAHGQCLNVPGAFRCECDPGFESTED
QRACQDVDECASGTLCAFGSCKNLPGTFHCVCSDGFALELGGARCSGVDECRHPASCING
RCVKTPDTYGCSCPQGFMQDPNSGSCVDTRVGNCFLAIQHRGDGGLSCNTEIGVRVPRAS
CCCSLGQAWGSPCELCPFINTTEHRALCPGGEGFRLSSITFALEDIDECQELPGLCQGGG
CIDTFGSFRCECPPGYRLQEDMSSCVDVDECLEEPTPCLFGTCTNTPGTFQCLCPEGFVL
SHSRHRCLDTRQSLCFTRFEAGKCSMPKAFNTTKTRCCCSQRPGKGWSHPCEPCPQEGSA
AFQELCPFGHGAVPGPDASREDVNECAENPDICGTGRCINTHGAFRCECPLGYTLDLTGF
ECVDTDECSSGQPCGAGTCTNIAGGFECACMDGFEPGPQMACEDIDECSRNPLLCAFRCI
NTNGSYLCTCPPGYALREDGATCQDMDECVLGSQDCQARGLLCKNLIGSFACVCPPGLRL
QPGGEGCTDADECRAQPRPCAHGRCLNTVGSFRCHCEPGFQPSPALTACHDVRRGYCLSE
VQSASCQAQRSGGEPVTHAECCCGGGRAWGPRCELCPLPGTPAHRALCPLGSGYTADGRD
VDECRMLGSLCTHGDCINSLGSFRCHCQAGFMPDAPATACLDVDECGQTPKPCAFRCHNT
EGSFHCTCPRGFVPEEGGRRCGDLDECASRRHNCQFFCANTIGAFTCRCPPGFTQHLQAC
FDSDECRSQPDPCGTHAHCRNTRGSFSCECAKGFRPRSSGPGCEDVDECNGPHGCPHGCE
NEPGSYHCHCPLGFIPHSHRGQCVDENECALTPDTCGSAACLNTLGSFRCECPSGFHFHP
ARGGCRDLDECATPGTPCRYGCANAPGGFLCGCPKGFFRAGQGHCISSLALGPDPQDTPE
AEELGPPKGCYECRIREHPSGNRARRSAQRDPQVNLASLDSEIPLTLSLNLTHLGLAQHI
LDLRPALRGPGSPGSYVIARGSGRCFFRLRRLHPGLTSLQLGRKPRPGTYGLEVVSLAGQ
GLWGRPLRLKLQLQVL
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggggagggcgcgccggggcgcacgcggggggctccccttctcctctccccacccgcag
ccagccctggcccgattctccagcgtgtcctatgggccagggcttctgcgggtggcatca
ttgcacttcctcctcccagcatccaaagtctttgttctccagggaccctatctggtctgg
aacggtgccctcgccatgggccagggtccttgggctcagctcctgatgccctggttggcc
ctggggtacctggtaggtgcccagggtctctgggtcggggccccggagacttcaggtccg
ggacgtgttcgcaggagaggtggacctcctatcttgcaagggcccaatgtgtgtggctcc
gggttccagtcctactgctgccccggctggaccacgcgccccggagggcacctgtgcgtc
gtgcctctctgcagacatgcctgtagcccggggttctgcttccaacccaacctgtgcatc
tgtgccaatgggcatcaggcccccagctgtggggtgagcagagaggtggggtgcagagtg
agctgcttgaatggtggcagttgcagaggggactcctgcctgtgccagaaggggtacacg
ggcaccctttgtggacaacccctatgtgaccatggctgccacaacggaggtcgctgcatc
ggccccaatctctgtgcctgcgtgtatggcttcctaggaccatggtgcgagagagactat
cggtcgggtccctgctttggccaagtggggccctggggctgcaagcaccagctgacgggc
ctcacgtccaccaaaaccctgtgctgcgccactgtggggcgtgcctggggcctgccctgt
gagccgtgtcctgcccagccgcacccctgccaccggggcttcctccccaatgtccacacg
ggtgcctgtcaggatgtggacgagtgtgtcagcctgcctggcctctgctctgggggcctc
tgcaccaacacggtggggggctacacctgtgtctgcccaccagggttcaccagcagccag
gatgggacacgctgcctggaccaccgggctggtatctgctacctggcactaattgggggg
cgctgtgtgggacccgctgccctgcgctacccccgagggtcatgctgctgtgaacggggc
aggtgctgggccgctggatcgtcccctgagccatgtcctgtccccggctcagctgagttc
cagcgactatgcccacatcagagaagcagcccagcctctgcaccaggcgctgcggttcca
ggctttggatcgacaccacaggacccccggggttctgagccagcggttcccagcctgagc
ctcagtgggactcatgtagacgctgctgaatgccagggcggggcccccagccccggctcc
ttccactgccgctgtcccgaggggctggtccagggcagcaaccatccatgtacaaccaac
caggtgcccaaccaggtgcccagccaggtggcccgccaggtgggcagcgcatgctacagc
ggcctggacgggaccagctgcacacgccccttccccggcaccttcaccagagcccagtgt
tgctgcgccagccccgagcaccacttcggggaaccctgcgaaccgtgcccagctcagaac
tcagctgagttccaggttctgtgccccagcagcctgggcttctccacggatgggagagac
atcgatgaatgtcacctctttcctgagatctgtggcccgggtacctgtcgaaacaccccg
ggcacctttgaatgccactgtccccagggctacaagagtagcttggcaccgaggcaacaa
tgtgtggatgtggatgaatgtgaggtggggggatccctctgtgaggcacatgcctcctgc
ctcaatttccctgggagtttccgctgccgctgccagccaggctggataggagatggactt
agatgccaagacctggatgaatgtacctcccacacacacccctgtgatcccnatggccac
tgcctcaacaccactggctcctatcactgtgcctgccagcctggctttctccagaatggc
ttctaccatgacagggatgaatgtgccgaggacagaaacctctgtgcccatgggcagtgc
ctcaacgtccccggcgcgttccgttgcgaatgtgacccgggcttcgagagcacagaggac
cagcgcgcctgccaggacgtggacgagtgtgcgtctgggaccctctgcgcctttgggagc
tgcaagaacttgcctggaacattccactgcgtgtgttcagacggctttgcactggagctg
ggaggcgcccggtgctcaggtgtggacgagtgcaggcaccccgcaagctgtatcaacggt
cgctgtgtgaaaactcctgacacctacggctgcagctgccctcagggcttcatgcaggac
cccaatagtggcagctgtgtggacacccgagtcggaaactgtttccttgccattcaacat
cgaggggatgggggcttgtcctgcaacaccgagattggggtccgcgtaccccgggcatcc
tgctgttgctccctaggccaggcctggggcagcccctgtgagctgtgcccattcatcaac
accacggagcaccgagccctgtgtcctggtggggaaggcttccggctcagctccatcact
tttgctctggaagacattgacgagtgccaagaacttccggggctgtgccagggaggtggc
tgcatcgacaccttcggcagcttccgatgtgagtgtccacctggctaccgccttcaggag
gacatgagcagttgtgtggatgttgatgagtgcttggaggagcccacgccctgcctcttt
ggaacctgcacgaacacccctggaacctttcagtgtctctgcccagagggctttgtcctc
tcccacagcagacacaggtgcttagacactaggcagagtctctgcttcacacgttttgag
gccggaaagtgctcgatgcccaaagcttttaacaccaccaaaactcggtgctgctgcagc
cagaggcctggcaagggctggagccatccctgcgagccatgtccacaggagggcagtgct
gcctttcaggagctctgcccctttggccatggtgcggttccaggcccagatgcctcccga
gaagatgtgaacgagtgtgcagagaaccccgacatctgtggcactggccgctgcatcaac
acccacggcgccttccgctgcgagtgtccccttggctataccctggatctgaccggcttc
gagtgtgtggacacagacgaatgttcctctgggcagccctgtggggctggaacttgcaca
aacattgcagggggctttgaatgtgcctgcatggatggttttgagccgggaccccagatg
gcctgtgaggacatcgacgagtgctcccggaaccctctgctctgtgccttccgctgcatc
aacacgaatgggtcctacctgtgcacctgcccgccaggctatgccctgcgtgaggacgga
gccacgtgccaagacatggacgagtgtgtgttggggtcccaggactgccaggcccggggt
ctgctctgcaagaatctcattggctccttcgcctgtgtctgccccccgggtctgcgcctc
cagccaggcggggagggctgcacggatgccgatgagtgtcgtgcccagccacgcccctgc
gcccatggccgctgcctcaacaccgtgggaagcttccgctgccactgtgagcctggcttc
cagcccagccctgccctcacggcctgccacgatgtccggcgagggtattgcctctccgag
gtgcagtcagcatcatgccaggctcagaggagtggtggggagcctgtcacccacgctgag
tgctgctgtgggggcggtcgcgcctgggggccccgctgtgaactctgccccctgcctggc
actccagcccacagggcattgtgcccacttggctctggctacactgcagatggccgagac
gtggatgagtgtcgcatgctgggatctctctgcacccacggtgactgcatcaacagcctc
ggctccttccgctgccactgccaggccgggttcatgcccgatgcccctgccactgcctgc
ctggacgtggatgagtgtggccagacccccaagccctgcgccttccgttgtcacaacacg
gaaggcagcttccactgcacctgtccacggggcttcgtgccagaagaggggggcagacgt
tgtggagacctggacgaatgtgcctcccggcgccataactgccagttcttctgcgccaac
accatcggggccttcacctgccgctgtccacctggcttcacccagcacttgcaggcctgc
tttgatagtgacgagtgcagaagccagcctgacccatgcgggacccatgcgcactgccgc
aacacacggggtagcttcagctgcgagtgtgcgaagggcttcaggccccgcagctcaggc
cctggctgtgaagatgtggatgaatgcaatgggccccatggctgcccccatggctgtgaa
aacgagccggggagctaccactgccactgtccattgggcttcatcccgcactcgcacagg
ggccaatgtgtggatgagaacgagtgtgccctgacccctgacacctgtggcagtgccgcc
tgccttaacaccctgggcagcttccgctgtgagtgcccctcaggcttccacttccacccc
gcccggggcggctgcagggacctggacgaatgcgccactcctgggaccccgtgcagatat
ggctgtgccaacgcgcccggaggcttcctgtgcggctgcccaaaaggcttcttccgggct
ggacagggtcactgcatttccagcctggctctcggtcccgacccccaggacaccccagaa
gcagaggagctagggcctcccaaaggctgctatgaatgcagaatcagggagcatccttct
gggaaccgtgctcggcgcagcgcacagagagacccacaggtgaacctggccagcctggac
tcggagattcctctaaccttgagcctcaacctgacccacctgggtctggcccagcacatc
ctggacttgcggccagcgctgaggggccctgggagtcccggcagttatgttattgcacgg
ggcagcggccgatgcttcttccgcctgcgtcgcctccaccctggtctcacctccttacag
ctgggccggaagcccaggcctgggacctacgggctggaggtggtaagcctggctgggcag
ggactgtggggccggcccctgaggctgaagttgcagctccaggtactgtag
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