Suncus etruscus (white-toothed pygmy shrew): 126030373
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Entry
126030373 CDS
T09902
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126030373 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126030373 (USP42)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126030373 (USP42)
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126030373 (USP42)
Ubiquitin system [BR:
setr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126030373 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
126030373
NCBI-ProteinID:
XP_049644528
LinkDB
All DBs
Position
15:77084428..77289319
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AA seq
1300 aa
AA seq
DB search
MTIVDKASESSEPSAYQNQPGSSEAVSPGDMDAGSASWAAVSSLNEVSNHTLALGPVPGA
VVYSNSSVPEKSKPSPQKEQGITHGVLWIPKPEAVLGDGIAPPQKVLFPSEKICLKWQQT
HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA
LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQA
TTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQTVNKALEQFVKPEQLDGE
NSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQ
PNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYV
LFYIRSHDVKNGGELAHSPHSPGQSSPRPVISQRVVSTKQPAAGLIGPQLPSHLAKNPPH
LNGTGPLKEAPSSSMSSPNGNSSIGRPGPVSASTSVQNWPVSRSSVLPEHPKKQKITISI
HNKSPARPGQPQSGLLGNPLEAPNKPTPSSTIPSPSAAQSTSSATASRATKPPGPTEPCP
RPVVNGQSRLHASILVPYGAESSEESDEEAKGLGRENGLGVGPSLGADASEACQLELRDT
MALNGVTRPDRDPRERGLSLDGPTCPAQPALHSESPFSKANGLPGKLMPAPLPPLPEDQI
LETFKLGSREKSSREEASPGQAEETPPGDSYAELEASSSPPVPREPPEPAACLSSQLKMA
LLPLDPSVSATKEAPESAEPMATDASPCAAQDRLLPACDPGRTTDDLSAGQDSRGTNSLS
PLRPLVPGGCVGQLSPTPSTCPEAVDCGHQLVVYMVRDHDLGTPAAPEAPLQGTGLRVEG
PPASLLDKPAKGPAEGGTEPSPGESSEENQAGHRGQDPSPAKERISSLRKVDRGHYRNRR
DRSSSGEHARESRSKTEDHYHKKRHGSERERPKQERHRLEHCSGSHGDRGSPVERRSLGR
LSHQLCRGRGSSDQDWSRHHPEGEHMWAREKYYPDRARWGKCRYYHDRYAGYVPREMREW
KAFHGDREYEYEYSRPHKDPYRGRKACDKERRHFGSPRTGPALYPDKYLHEKMALGPEGS
CDFSDRFRGPENTKPRKRRHDSLEDSDSHGEKPAWRSMPKGPLEEPKVKKHKKSKKKKKS
KDKHRTRDSRHPPDSDLSGAYSDADLHRHKKKKKKKKRHSRRSEDLGHFPQASGPESADL
FRRTDGGLPPADGPALDRTKPFRMGRRADRCPLSECGQGD
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagagccctcagcctatcagaaccagcct
ggcagctctgaggccgtctcacctggagacatggatgcgggctctgccagctgggctgct
gtgtcttccctcaatgaagtctccaaccacacgctagctctaggaccagtacctggtgct
gtagtttattccaattcatctgtacctgagaaatccaagccatcaccgcagaaggagcaa
ggaatcactcatggtgtgctttggataccaaagccagaagcagtcctaggtgatggcatt
gctcctccacagaaagtccttttcccatctgagaagatttgtctcaagtggcagcagacc
catagagtcggagctgggctccagaatctgggcaacacctgctttgccaacgcagccttg
cagtgtttgacttacacgccacccctcgccaactacatgctctcacacgaacactccaag
acctgccacgccgaagggttttgtatgatgtgcacaatgcaggcgcacatcacccaggcc
ctcagcaatcccggggacgttatcaaacccatgttcgtcattaacgagatgcgacggata
gccagacacttccgctttgggaaccaggaagatgcacacgagttcctgcaatatacagtt
gacgctatgcaaaaagcctgtctgaacggcagcaacaagttagacagacatacccaggct
accacactcgtttgtcagatatttggtggatacctaagatctagagtcaaatgtttaaat
tgcaaaggtgtttcagatacttttgatccataccttgatataacattggagataaaggct
gctcagactgtgaataaggctttggagcagtttgtaaaaccagaacagctggacggagaa
aactcatataagtgcagcaaatgtaaaaagatggttccagcatcaaagaggttcaccata
caccggtcctctaatgttcttactctgtccctcaaacgttttgcaaattttactggtgga
aaaattgctaaggatgtgaaataccccgagtacctggacattcggccgtatatgtcacag
cccaacggggagccgatcatctatgtcttgtatgcagtgctggtccacacaggctttaac
tgccatgctggccactacttctgctacatcaaggctagcaatggcctctggtaccagatg
aacgactccatcgtctccaccagtgacattagatcggtactcagccaacaagcttacgtt
cttttctatatcaggtcccacgatgtgaagaatggaggtgaacttgctcattccccacac
agccccggccagtcttcaccccgacccgtcatcagtcagagggtggtcagcactaaacag
cccgcagcggggctcatcgggccgcaactgccctcacacttggccaagaacccaccacac
ctgaatgggacggggccactcaaggaggcgcccagcagctccatgtcgagcccaaatgga
aattccagtatcggcaggcctggacccgtcagtgcttcaacctctgttcagaactggccc
gtcagtcggtcctcagttcttccggagcaccccaagaagcaaaagatcaccatcagtatt
cacaacaaatcaccggcacgccctgggcagccccagtccggccttctgggcaaccccctg
gaagcccccaacaagcctaccccctcctccaccatccccagcccctctgcagcacagtct
acctcgagtgccacagctagcagggccacgaagccacctggccccactgagccttgcccg
cgcccggtggtaaacggtcagtccaggctacacgccagcatcctggtcccctatggagcc
gagtcatctgaggagtctgacgaggaggccaagggcctgggcagggagaatggcctgggt
gtggggccatctttgggcgccgatgccagcgaggcctgtcagctagagctccgggacacc
atggcactgaatggtgttacccgtccagacagggacccaagggagcgagggctctccctg
gatgggcctacctgcccagcccagcctgcactgcactcagaaagtcccttctctaaagcc
aatggtttacctggaaagctgatgcctgctccattgccacctctccctgaagatcaaatc
ttagagaccttcaagcttggaagccgagaaaaaagctctagagaggaggccagtcctggc
caggcagaggaaacccctccaggggactcctatgcagagctggaggccagcagttcccct
cctgtgccccgggagcccccggagccagcggcctgtctgagcagccagctgaagatggcc
ttgctgcctcttgaccccagcgtctctgccaccaaagaagcacctgagagtgccgagccc
atggccactgatgccagcccatgtgcggcccaggacaggctcctgccagcatgtgacccc
gggcgcaccacagacgacttgagtgcaggccaggacagcagagggaccaactctttgagc
ccactccggccgttggtgcctgggggctgtgtggggcagctgagtcccacaccctcaacc
tgccctgaggctgtggactgcggccatcagcttgtggtgtacatggtccgagaccatgat
ttgggaacccctgctgcccccgaggcccctctgcagggcaccgggctgagagtcgagggg
ccacctgcatcccttctggacaagccggcaaaaggccctgcagaagggggcacagaaccg
agccctggcgagagcagtgaagagaaccaggcaggacatcgggggcaggacccatctcca
gctaaggagagaattagtagcctccggaaagtagatcgaggccactaccggaaccgcaga
gaccggtcctccagtggggagcatgcaagggagagtcggagcaagacggaggaccattac
cacaaaaagcggcatgggtccgagcgggaacggcctaagcaggagcgtcaccggctggag
cactgcagtgggagccacggtgacagaggcagcccagttgagcggcgttctctgggcagg
ctcagccaccagctgtgccgtggcagaggcagctcagaccaggactggagccggcaccat
cccgagggcgagcacatgtgggcccgggagaagtactaccctgacagggcgcgttggggc
aagtgccgctactaccatgaccgctatgcaggctatgtgccgcgggagatgcgggagtgg
aaagccttccatggggaccgcgagtatgagtacgagtacagcaggccccacaaggacccc
taccgaggccggaaggcctgtgacaaggagcggcgccactttggcagcccccgcacaggc
cccgcactctaccccgacaagtacctgcatgagaaaatggcacttggacctgaaggcagc
tgtgacttctctgaccgcttccgggggcccgagaacacgaagccccggaaacggagacac
gacagcctggaggattctgacagccatggggagaagccagcttggaggagcatgcccaag
ggccctttagaagagcccaaggtgaagaagcataaaaagtccaagaagaaaaagaaatcc
aaagacaagcaccgcactcgagactccaggcaccccccagactccgacctctctggcgcc
tactctgatgcagacctccacagacacaagaagaagaagaagaaaaagaagcgacactcc
aggcggtcagaggacttggggcacttcccacaggcctccgggccagagtctgctgacctc
ttccgcaggactgatggggggctaccccctgccgatggcccggcccttgacagaaccaaa
cccttccggatgggaaggagggctgacaggtgtcctctgtctgagtgtggccagggtgat
tga
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