Suncus etruscus (white-toothed pygmy shrew): 126030391
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Entry
126030391 CDS
T09902
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126030391 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126030391 (TAF6)
03036 Chromosome and associated proteins [BR:
setr03036
]
126030391 (TAF6)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126030391 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
126030391 (TAF6)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126030391 (TAF6)
STAGA complex
126030391 (TAF6)
TFTC complex
126030391 (TAF6)
SAGA complex
126030391 (TAF6)
SLIK complex
126030391 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
Histone
TFIID-18kDa
DUF3275
Motif
Other DBs
NCBI-GeneID:
126030391
NCBI-ProteinID:
XP_049644550
LinkDB
All DBs
Position
15:75740149..75747100
Genome browser
AA seq
715 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEDTCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKS
KGQGAAPADSKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKSLILPRLQQEGERIRAVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDTYRTEFGSLGPVLCSHVVKARAQATLQAQQVNRT
TLTITQVSMGLHSPWARTAWSDTFFSNLTSRSPVYSRGPHSPSHKPPSLALAPLVCSRCL
ALLRCLCRPWCLHELPPHRSHPLLPPSSSSCPPPPPALRLPNRSCPSAPRPLAPAPLPRL
QSPPQSPACSPSSSWSPPPPQRLPPPPPLGPAVSRSTSWSHCPQLAKAKVGPPRTHPHWG
AAPSVGGSRRLERALHQTLGPQRLMALSPQVPTPHQLRLETWGRERWRLPVLLRF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaagctgaagctcagcaacacagtgctgccatccgagtccatgaag
gtggtggctgagtccatgggcatcgcccagatccaggaggacacatgccagctgctgaca
gatgaagtcagctaccgcattaaggagatagcccaggatgccctgaagttcatgcacatg
gggaagcggcagaagctgaccaccagtgacatcgactatgccttaaagctgaagaatgtt
gagcccttgtatggcttccatgcccaggagttcattcccttccgctttgcctctggtgga
ggccgtgagctctacttctatgaggagaaggaggtggatctgagcgacatcatcaacacc
cctctgcccagagtgcccctggacgtctgcctcaaagcacattggctgagcattgaaggc
tgccagcctgccattcctgagaatccgcctccagctccgaaggagcagcagaaggccgag
gccacagagcctctgaagtcagccaagccgggccaggaggaagatggccccctgaaaagc
aaaggccaaggggctgccccagcagatagcaaagggaaggagaagaaggcaccacccctc
ttggaaggcggcccccttcggctcaagccccgcagcatccatgagctgtctgtggagcag
cagctgtactacaaggagatcaccgaggcttgtgtaggctcgtgtgaagccaagagagcg
gaagctctacagagcatcgccacagatcctgggctctatcagatgttgccccggttcagc
accttcatctctgagggggtccgcgtgaacgtggtgcagaacaacctagcccttctcatt
tacctgatgcgcatggtcaaggcgctcatggacaacccaacactgtacctggagaaatat
gtgcatgagctgatcccagccgtgatgacgtgcatcgttagcagacagctgtgcctacgg
ccagatgtggacaaccactgggcactgcgtgactttgctgcccgcctagtagcccagatc
tgcaagcacttcagcacaaccaccaacaacatccagtcccgcatcaccaagaccttcacc
aagagctgggtggatgagaagacaccatggaccacacgctacggctccattgcaggcctg
gctgagctgggacatgacgtcataaagtccctgatactgccacggctacagcaggagggg
gagcggatccgcgcggtgctcgatggcccagtgctcagtaacatcgaccgcattggtgcc
gaccacgtgcagagtctgctgctgaaacactgcgccccagtcctagccaagcttcgccca
ccacccgacaatcaggacacctaccgaactgagtttggatccctggggcccgtcctctgc
tcacatgtggtcaaggcacgggcccaggccacgctgcaggcccagcaggtcaacaggacc
acactgaccatcacacaggtcagcatgggtcttcacagtccatgggcaaggacggcctgg
tctgacactttcttctccaacctgacttctcgctctcctgtctacagccgaggcccacac
tcaccctctcacaagccccccagtctggccctcgcacccctggtttgctcaaggtgcctg
gctctattgcgctgcctatgcagaccctggtgtctgcacgagctgccgccccaccgcagc
catcccctcctcccaccaagttcatcgtcatgtcctcctcctcctccagcgcttcgtcta
cccaacaggtcctgtccctcagcacctcggcccctggctccggctccactaccacgtctc
cagtcaccaccacagtccccagcgtgcagcccatcgtcaagttggtctccacctccacca
cagcgcctcccaccaccgccccctctgggcccggcagtgtccagaagtacatcgtggtct
cattgcccacaactggcgaaagcaaaggtgggcccgcctcgcacccatccccactggggg
gcagcaccctctgtggggggaagcaggaggctggagagagccctccaccaaaccctggga
ccccaaaggctaatggctctcagccctcaggtgccaactccccaccaactgcgccttgag
acgtggggaagagagagatggcggcttcctgtgttacttcgtttttag
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