Suncus etruscus (white-toothed pygmy shrew): 126030434
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Entry
126030434 CDS
T09902
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04136
Autophagy - other
setr04140
Autophagy - animal
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126030434 (WIPI2)
04136 Autophagy - other
126030434 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126030434 (WIPI2)
05014 Amyotrophic lateral sclerosis
126030434 (WIPI2)
05016 Huntington disease
126030434 (WIPI2)
05017 Spinocerebellar ataxia
126030434 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
126030434 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126030434 (WIPI2)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126030434 (WIPI2)
Membrane trafficking [BR:
setr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
126030434 (WIPI2)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126030434 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
BCAS3_WD40
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
126030434
NCBI-ProteinID:
XP_049644608
LinkDB
All DBs
Position
15:complement(77890145..77909904)
Genome browser
AA seq
430 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSISNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGAKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSL
DGVFLSASSNTETVHIFKLETVKENSPRPQEEPTTWTGYFGKVLMASTSYLPAQVTEMFT
QGRAFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKL
DGGSTETTHDILDSASQDCPLVAQPYSPAAAAKAYTEELGAVGGACLEEEAGALRLEEDS
EHPPMILRTD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagcggcgaggccggcgccggccagctgctgttcgccaacttc
aaccaggacaacacgtctctagctgttggtagtaagtccggttataaatttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgacaccgaggatgtatgcatc
gtggagaggctcttctccagcagcctcgtggccatcgtcagtctcaaggcgccacggaag
ctcaaggtgtgtcacttcaagaaaggcaccgagatctgcaactacagctactccaacacc
atcctggccgtgaagctgaaccgccagaggctgatcgtgtgtctggaggagtctctgtac
atccacaacatccgggacatgaaggtgctgcacaccatccgggagacacccccaaaccct
gcaggcctgtgcgctctgtccatcagcaatgacaactgctacctggcttacccgggcagt
gccaccattggtgaggtgcaggtcttcgataccatcaacctgagagctgccaacatgatc
ccggctcatgacagcccactggcagcactggcctttgatgcgagcggtgccaagctggcc
acagcctccgagaaggggaccgtgatccgggtattttccattccagaaggacagaaactc
tttgaattccggagaggagttaagaggtgtgtgagcatctgctcactggccttcagcttg
gacggagtcttcctctcggcgtccagcaacacggagacagtgcacatcttcaagctcgag
actgtgaaggagaattcccccaggccccaggaggagcccaccacctggaccggctacttt
gggaaggtgctcatggcctccaccagctacctgccagcccaggtcaccgagatgttcaca
cagggccgcgccttcgccaccgtgcgcctgcctttctgcggccacaagaacatctgctcg
ctggccacaatccagaagattccccggttactggtgggggcatctgatggctacttatac
atgtacaacctggacccccaggaaggcggcgagtgcaccctaatgaagcagcacaagttg
gacggcggcagtactgagaccacccacgacattctggactcagcctcccaggactgtccc
ctggtggcacagccctacagccccgctgcagcggccaaagcctatacagaggagctgggc
gccgtgggcggtgcctgcctggaggaggaggcaggtgcgctgagactggaggaggacagt
gagcatcccccgatgatccttcgtactgactga
DBGET
integrated database retrieval system
