Suncus etruscus (white-toothed pygmy shrew): 126030576
Help
Entry
126030576 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126030576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126030576
03036 Chromosome and associated proteins [BR:
setr03036
]
126030576
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126030576
Coactivators
SAGA/TFTC/STAGA complex
126030576
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126030576
STAGA complex
126030576
TFTC complex
126030576
SAGA complex
126030576
SLIK complex
126030576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Bromo_TP
Histone
CBFD_NFYB_HMF
TFIID-31kDa
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
126030576
NCBI-ProteinID:
XP_049644752
LinkDB
All DBs
Position
15:25024746..25026715
Genome browser
AA seq
656 aa
AA seq
DB search
MAEAKRLKLSNTVLPSESMKVVAESMGINQIPENACQLLTEEVSYHIKEIAQEALKFMQM
GKRRKLTTGDMDYAFKLKNVEPLYGFQAQEFIPFHSASGGGQELYFYEDKEVDLSDIINT
PLHRVPLDVCLKAHWLIIEGCQPAIPENPPPAPKEQQKVKAMQPXNTAKPGQEDDGFLKG
KGVALAASKGKKQKVLAFLDGTPFRLKPRSIHELSVEQQLYYRAITEACVGSCEAKRVQA
LQSIATDPGLSQMLPWFSTFISEGVRVNVVHNNLALLIYLMRMVKALMDNPTLYLEKYAH
ELLPAVLTCTVSKQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQARITKIFAES
CMDEKNPWTTRYGSIAGLAELGHDVIKSLILPRLQQEGERIQAVLDCPSLSHMDRIGAEH
VQNLLLKHCAPVLAKMRLPPDNQDTYHTEFGSLGAVLCSHVVKARAQAMLQAQQVHKATL
TITQPQPTLTPSQAPQSVPHTPALLKVPGSVLMPMQTLVSSRSPAPPQPSPPPTKFLIKS
SSSSNSASSTQQVLSLSTSVPSSSSTTMSRITTTVPSMQPRVKVVSTPPKAPTTTLASGP
GSVQKYIVVSFPPTGKSKVRPTSNLSPLGGSNLCGKKQEAGEKPPIHLGTPKDNGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgaaaaggctaaagctcagtaacacggtgctgccatctgagtccatgaag
gtggtggcggagtccatgggcatcaaccagatcccagagaatgcatgccagctgctgaca
gaggaggtcagctaccacatcaaagagatcgcccaggaggccctgaagttcatgcagatg
gggaagcggaggaagctgaccactggcgacatggactacgccttcaagttgaagaatgtg
gagcccctgtatggattccaggcccaggagttcattcccttccactccgcctctggtggg
ggccaggagctctacttctatgaggacaaggaggtggatctgagtgacattatcaacacc
cctctgcacagagtgcccctggacgtctgcctcaaggcgcactggttgatcattgaaggc
tgtcagcccgccattcccgagaacccacctccagctcctaaggagcagcagaaggtcaag
gccatgcaacctntgaacacagccaagccgggccaggaggatgatggcttcctgaaagga
aaaggggttgccctggctgctagcaaggggaagaaacagaaggtgctggcctttctggat
ggcaccccctttcggctcaagccccgcagtatccatgaactatcagtggagcagcaactc
tactacagggcaatcactgaggcctgtgtaggctcctgtgaagccaagagagtgcaagct
ctccagagcatcgccacagaccctgggctatcccagatgctgccctggttcagcaccttc
atctcggagggggtccgtgtgaacgtggtgcacaacaacctagccctgctcatctacctg
atgcgcatggtcaaggcgctcatggacaacccaacactgtacctggagaaatatgcgcac
gagctactcccagctgtgttgacatgcaccgttagcaaacagctgtgtctgcggccagat
gtggacaaccactgggcactgcgtgattttgctgcccgcctggtggcccagatctgcaag
cacttcagcacaaccaccaacaatatccaggcccgcatcaccaagatcttcgccgagagt
tgcatggatgagaagaacccctggaccacgcgctatggctccattgcaggcttggctgag
ctgggacatgatgtcatcaagtccctgatcctgccacggctacagcaggagggtgagcgg
atccaagccgtgcttgattgcccatcgctcagccacatggaccgcataggtgccgaacac
gtgcagaacctgctgctgaaacattgtgccccggtcctagccaagatgcgactgccacct
gacaatcaggacacctaccacaccgagttcggatccctgggagctgtcctctgctcacat
gtggtgaaagcacgggcccaggccatgctgcaggcccagcaagtccacaaggccacactg
accatcacgcagccgcagcccacactcaccccctcacaggccccacagtctgttcctcac
actcctgctttgctcaaggtgcctggttctgtcctgatgcctatgcagaccctggtgtct
tcacgatcccctgccccaccacagccatcccctcctcccaccaagttcctgataaagtcg
tcatcctcctccaacagtgcctcatccacccagcaggtcctgtccctcagcacctcggtg
cctagctccagctccaccactatgtcccgaatcaccaccacagtccccagcatgcagccc
agggtcaaggtagtctccactcctcccaaagcgcccacaaccaccttagcctctggacct
ggcagtgtccagaagtacatcgtggtctcatttcccccaactggaaaaagcaaagttcgg
cccacctcaaacctgtctccgctggggggtagcaacctctgtgggaagaaacaagaggct
ggggagaaacccccaatacaccttgggaccccaaaggacaatggctcttaa
DBGET
integrated database retrieval system
