Suncus etruscus (white-toothed pygmy shrew): 126030578
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Entry
126030578 CDS
T09902
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126030578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126030578
03036 Chromosome and associated proteins [BR:
setr03036
]
126030578
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126030578
Coactivators
SAGA/TFTC/STAGA complex
126030578
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126030578
STAGA complex
126030578
TFTC complex
126030578
SAGA complex
126030578
SLIK complex
126030578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Bromo_TP
CBFD_NFYB_HMF
TFIID-18kDa
TFIID-31kDa
Histone
Motif
Other DBs
NCBI-GeneID:
126030578
NCBI-ProteinID:
XP_049644753
LinkDB
All DBs
Position
15:24997899..24999869
Genome browser
AA seq
656 aa
AA seq
DB search
MAEAKRLKLSNTVLPSESMKVVAESMGINQIPENACQLLTEEVSHHIKEITQEALKFMQM
GKRRKLTTGDLDYAFKLKNVEPLYGFQAQEFIPFHSASGGGQELYFYEDKEVDLSDIINT
PLHRVPLDICLKAHWLSIEGCQPAIPENPPPAPKEQQKVKAMQPLKSAKPGQENEGFLKG
KGAALAASKGKEQKVPAFLKGTPFRLKPRSIHELSVEQQLYYRAITEACVGSCEAKRVQA
LQSIATDPGLSQMLPWFSTFISEGVRLNVVHNNLALLIYLMRMVKALMDNPTLYLEKYAH
ELLPAVLTCTVSKQLCLRPDVYNHWALRDFAARLVAQICKHFSTTTNNIQARITKIFTES
CVDEKTPWTTRYGSIAGLAELGHDVIKSLILPRLQQEGERIQAVFDGPVLSHMDRIGAEH
VQNLLLKHCAPVLAKLRQPPDNQDNYHTEFGSLGAVLCSHVVKARAQATLQAQQVHKATL
TITQPQPTLTLSQAPQSVPHTPGLLKVPGSVLMPMQTLVSSQSSAPPQPSPPPTKFLIKS
SSSSTSASSTQQVLSLSTSMPGSSSTTMSRITTTVPSMQPRVKLVSTTPKAPTTTLTSGP
GSVQKYIVVSFPPTGKSKVRPTSNLSPLGGSNLCGKKQEAGEKPPIHLGTPKDNGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgaaaaggctaaagctcagtaacacggtgctgccatctgagtccatgaag
gtggtggcggagtccatgggcatcaaccagatcccagagaatgcatgccagctgctgaca
gaggaggtcagccaccacatcaaagagatcacccaggaggccctgaagttcatgcagatg
gggaagcggaggaagctgaccactggcgacttggactacgccttcaagttgaagaatgtg
gagcccctgtatggattccaggcccaggagttcattcccttccactccgcctctggtggg
ggccaggagctctacttctatgaggacaaggaggtggatctgagtgacattatcaacacc
cctctgcacagagtgcccctggacatctgcctcaaggcgcactggttgagcattgaaggc
tgtcagcccgccattcccgagaacccacctccagctcctaaggagcagcagaaggtcaag
gccatgcaacctctgaagtcagccaagccgggccaggagaatgaaggcttcctgaaagga
aaaggggctgccctggcagctagcaaggggaaggagcagaaggtgccggccttcctgaaa
ggcaccccttttcgtctcaagccccgcagtatccatgaactctcagtggagcagcaactc
tactacagggcaatcactgaggcctgtgtaggctcctgtgaagccaagagagtgcaagct
ctccagagcatcgccacagaccctgggctatcccagatgctgccctggttcagcaccttc
atctcggagggggtccgtttgaacgtggtgcacaacaacctagccctgctcatctacctg
atgcgcatggtcaaggcgctcatggacaacccaacactgtacctggagaaatatgcgcat
gagctactcccagctgtgttgacatgcaccgttagcaaacagctgtgtctgcggccagat
gtgtacaaccactgggcactgcgtgactttgctgcccgcctagtggcccagatctgcaag
cactttagcacaaccaccaacaatatccaggcccgcatcactaagatcttcaccgagagt
tgcgtggacgagaagaccccctggaccacgcgctatggctccattgcaggcttggctgag
ctgggacatgatgtcatcaagtccctgatcctgccacggctacagcaggagggtgagcgg
atccaagccgtgtttgatggcccagtgctcagccacatggaccgcataggtgcagaacac
gtgcagaacctgctgctgaaacattgtgccccggttctggccaagctgcgacagccacct
gacaatcaggacaactaccacaccgagttcggatccctgggagctgtcctctgctcacat
gtggtgaaggcacgggcccaggccacgctgcaggcccagcaagtccacaaggccacactg
accatcacgcagccgcagcccacactcaccctctcacaggccccacaatctgttcctcac
actcctggtttgctcaaggtgcctggttctgtcctgatgcctatgcagaccctggtgtct
tcacaatcctctgccccaccacaaccatcccctcctcccaccaagttcctgatcaagtcg
tcatcctcctccaccagcgcctcatccacccagcaggtcctgtccctcagcacctcgatg
cctggctccagctccaccaccatgtcccgaatcaccactacagtccccagcatgcagccc
agggtcaagctggtctccactactcccaaagcgcccacaaccaccttaacctctgggcct
ggcagtgtccagaagtacatcgtggtctcatttcccccaactggaaaaagcaaagttcgg
cccacctcaaacctgtctccgctggggggtagcaacctctgtgggaagaaacaagaggct
ggggagaaacccccaatacaccttgggaccccaaaggacaatggctcttag
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integrated database retrieval system
