Suncus etruscus (white-toothed pygmy shrew): 126030579
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Entry
126030579 CDS
T09902
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126030579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126030579
03036 Chromosome and associated proteins [BR:
setr03036
]
126030579
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126030579
Coactivators
SAGA/TFTC/STAGA complex
126030579
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126030579
STAGA complex
126030579
TFTC complex
126030579
SAGA complex
126030579
SLIK complex
126030579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
Bromo_TP
Histone
TFIID-31kDa
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
126030579
NCBI-ProteinID:
XP_049644755
LinkDB
All DBs
Position
15:25060941..25062908
Genome browser
AA seq
655 aa
AA seq
DB search
MAEAKRLKLSNTVLPSESMKVVAESMGINQIPENACQVLTEEVSHHIKEIAQEALKFMQM
GKRRKLTTGDMDYAFKLKNVEPLYGFQAQEFIPFHSASGGGQELYFYEDKEVDLSDIINT
PLHRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKVKAMQPLKSAKPGQEDDGFLKG
KGAALGASKGKEQKVPAFLDGTHFRLKPRSIHELSVEQQLYYRAITEACVGSCEAKRVQA
LQSIATDPGLSQMLPWFSTFISEGVRVNVVQHNLALLIYLMRMVKALMDNPTLYLEKYAH
ELLPAVLTCTISKQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQARITKIFTES
CLDEKTPWTTHYGSIAGLAELGHDVIKSLILPRLQQEGERIQAVLDGPVLSHMDRIGAEH
VQNMLLKHCAPVLAKLRHPPDNQDTYHTEFGSLGAVLCSHVVKARAQAMQAQQVHKATLT
ITQLQPTLTLSHAPQSVPHTPGLLKVPGSVLMPVQTLVSSQSSASPQPSPPPTKFLIKSS
SSSTSPSSTQQVLSLSTSVPSSSSTTMSRITTTVPSMQPRVKVVSTTPKAPTTTLASGPG
SVQKYIVVSFPPTGKSKVRPTSNLFPLGGSNLCGKKQEAGEKPPIHLGTPKDNGS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgaagaggctaaagctcagtaacacggtgctgccatctgagtccatgaag
gtcgtggcggagtccatgggcatcaaccagatcccagagaatgcatgccaggtgctgaca
gaggaggtcagccaccacatcaaagagatcgcccaggaggccctgaagttcatgcagatg
gggaagcggaggaagctgaccactggcgacatggactacgccttcaagttgaagaatgtg
gagcccctgtatggattccaggcccaggagttcattcccttccactccgcctctggtggg
ggccaggagctctacttctatgaggacaaggaggtggatctgagtgacattatcaacacc
cctctgcacagagtgcccctggacgtctgcctcaaggcgcactggttgagcattgaaggc
tgtcagcccgccattcccgagaacccacctccagctcctaaggagcagcagaaggtcaag
gccatgcaacctctgaagtcagccaagccgggccaggaggatgatggcttcctgaaagga
aaaggggctgccctgggagctagcaaggggaaggagcagaaggtgcccgccttcctggat
ggcacccactttcggctcaagccccgcagtatccatgaactatcagtggagcagcaactc
tactacagggcaatcactgaggcctgtgtaggctcctgtgaagccaagagagtgcaagct
ctccagagcatcgccacagaccctgggctatcccagatgctgccctggttcagcaccttc
atctcggagggggtccgtgtgaacgtggtgcagcacaacctagccctgctcatctacctg
atgcgcatggtcaaggcgctcatggacaacccaacactgtacctggagaaatatgcgcat
gaactactcccagctgtgttgacatgcaccattagcaaacagctgtgtctgcggccagat
gtggacaaccactgggcactgcgtgactttgctgcccgcctagtggcccagatctgcaag
cacttcagcacaaccaccaacaatatccaggcccgcatcaccaagatcttcaccgagagt
tgcttggatgagaagaccccctggaccacgcactatggctccattgcaggcttggctgag
ctgggacatgatgtcatcaagtccctgatcctgccacggctacagcaggagggtgagcgg
atccaagccgtgcttgatggcccagtgctcagccacatggaccgcataggtgctgaacac
gtgcagaatatgctgctgaaacattgtgccccggttctggccaagctgcgacatccacct
gacaatcaggacacctaccacaccgagttcggatccctgggagctgtcctctgctcacat
gtggtgaaggcacgggcccaggccatgcaggcccagcaagtccacaaggccacactgacc
atcacgcagctgcagcccacactcaccctctcacatgccccacagtctgttcctcacact
cctggtttgctcaaggtgcctggttctgtcctgatgcctgtgcagaccctggtgtcttca
caatcctctgcctcaccacaaccatcccctcctcccaccaagttccttatcaagtcgtca
tcctcgtccacgagcccctcatccacccagcaggtcctgtccctcagcacctcggtgcct
agctccagctccaccactatgtcccgaatcaccaccacagtccccagcatgcagcccagg
gtcaaggtagtctccactactcccaaagcgcccacaaccaccttagcctctgggcctggc
agtgtccagaagtacatcgtggtctcatttcccccaactggaaaaagcaaagttcggccc
acctcaaacctgtttccgttggggggtagcaacctctgtgggaagaaacaagaggctggg
gagaaacccccaatacaccttgggaccccaaaggacaatggctcttag
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integrated database retrieval system
