Suncus etruscus (white-toothed pygmy shrew): 126030581
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Entry
126030581 CDS
T09902
Symbol
DTX1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126030581 (DTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126030581 (DTX1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126030581 (DTX1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126030581 (DTX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
WWE_5
zf-rbx1
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
zf-RING_Vps41
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
126030581
NCBI-ProteinID:
XP_049644760
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All DBs
Position
15:21380389..21414588
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AA seq
626 aa
AA seq
DB search
MSRPGQGVMVPGSGLGFPPQNVARVVVWEWLNEHSRWRPYTATVCHHIENVLKEDARGSV
VLGQVDTQLVPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDAGAWTA
YDMDICITIQNAYEKQHPWLDLSSLGFCYLIYFNSMSQMNRQTRRRRRLRRRLDLAYPLT
VGTIPKSQSWPVGASSGQPCSCQQCLLVNSTRAASNAILASQRRKATLPPPPPPPGGPPG
VPPTVRPSATFAGPALWATSPAINGTTEPGPGPGAPPRSPSAPNSAPTPGQNNLNRPGPQ
RTTSVGTRAAVPPGVPALPVKNLNGTGPVHPALAGMTGILLCAAGLPVCLTRAPKPILHP
PPVSKSDVKPVPGVPGVCRKTKKKHLKKSKNPEDVVRRYTHKVKSPPDEDCTICMERLVT
ASGYEGVLRHKGMRPELVGRLGRCGHVYHLLCLLAMYSNGNKPSPPQDGSLQCPTCKAIY
GEKTGTQPPGKMAFHLIPHSLPGFADTQTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRH
CYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGY
PDASYLDNVLAELTAQGVSEAVGTKA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcctggccagggcgtgatggtgccggggagcggcctgggcttccccccgcag
aacgtggcccgcgtggtggtgtgggagtggctcaacgagcacagccgctggcggccctac
acggccaccgtgtgtcaccacatcgagaacgtgctcaaggaggacgcgcgcggctccgtg
gtcctggggcaggtggacacccagcttgtgccctacataatcgacctgcagtccatgcac
cagttccgccaggacaccggtaccatgaggccagttcggcgcaacttctacgacccatcg
tcggcgcccggcaagggcatcgtgtgggagtgggagaacgatgcgggagcgtggacagcc
tacgacatggacatctgcatcactatccagaacgcctacgagaagcagcacccgtggctg
gacctgtcgtcgctgggcttctgctacctcatctacttcaacagcatgtcccagatgaac
cgccagacccgccggcgccgccgcctgcgccgccgcctggacctcgcctacccactcacg
gtgggcaccatccccaagtcccagtcctggcccgtgggtgccagctcgggccagccctgc
tcctgccagcagtgcctgctggtcaacagcacccgggcggcctccaacgccatcctggcc
tcccagcgccgcaaggccactctgccacctccaccaccgcctccgggaggacctccgggg
gtgccccccaccgtgcgccccagcgccaccttcgcgggccccgcgctctgggccacctca
cctgccatcaatggcaccaccgagcccgggcccggtcctggagcgcctccgaggagcccc
agtgcccctaacagtgcgcccaccccaggacagaacaacctcaaccgacccggaccccag
cgcaccaccagtgtgggcacacgcgcagctgtcccgcctggggtccctgcactccccgtg
aagaacttgaacggcactgggcccgtccatccagccctggcagggatgactgggatcctg
ctatgtgctgctggcctgcctgtatgcctgactcgggcccccaagcccatcctgcacccg
ccgcctgtcagcaagagcgacgtgaagccggtgcctggcgtgcccggggtgtgccgaaag
accaagaagaagcacctgaagaagagtaagaaccccgaggatgtggtgcggaggtacaca
cacaaagtgaagagcccaccggatgaggactgcaccatctgcatggagcggctggtcacg
gcctccggctatgagggcgtgctgcggcacaagggcatgcggccggagctggtgggtcgc
ctgggccgctgcggccatgtgtaccacctgctgtgccttctggcaatgtactccaacggt
aacaagccctccccaccccaggatggcagcctgcagtgccccacctgcaaggccatctac
ggagagaagacgggcacccagccgcctgggaagatggcattccatctcatcccacactcg
ttgcccggctttgccgatacccagaccatccgcatcgtctatgacatccccacaggcatc
cagggcccagaacatcctaacccgggcaagaagttcaccgcaagagggttcccgcgtcat
tgctacctgcccaacaatgagaaaggccggaaggtgctgcggctgcttatcaccgcctgg
gagcggagactcatcttcaccatcggcacgtccaacaccacgggggagtcggacaccgtg
gtgtggaacgagatccatcacaagaccgagtttggctccaacctcacgggccacggctac
ccggacgccagctacctggacaacgtgctggccgagctcacggcccagggcgtgtccgag
gctgtggggaccaaggcctga
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