Suncus etruscus (white-toothed pygmy shrew): 126030615
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Entry
126030615 CDS
T09902
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03030
DNA replication
setr03410
Base excision repair
setr03420
Nucleotide excision repair
setr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126030615 (RFC5)
03410 Base excision repair
126030615 (RFC5)
03420 Nucleotide excision repair
126030615 (RFC5)
03430 Mismatch repair
126030615 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setr03032
]
126030615 (RFC5)
03036 Chromosome and associated proteins [BR:
setr03036
]
126030615 (RFC5)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126030615 (RFC5)
DNA replication proteins [BR:
setr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126030615 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
126030615 (RFC5)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
126030615 (RFC5)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126030615 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
126030615 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
ResIII
DUF815
AAA_30
AAA_19
AAA_5
ATPase_2
PhoH
AAA_7
TIP49
TniB
nSTAND3
DNAX_ATPase_lid
Mg_chelatase
bpMoxR
Thioredoxin_6
NPHP3_N
AAA_3
AAA_28
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126030615
NCBI-ProteinID:
XP_049644797
LinkDB
All DBs
Position
15:complement(23961315..23974387)
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AA seq
331 aa
AA seq
DB search
MELTGAKLRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTST
ILACAKQLYKEKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADA
MTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPELMVPRLEHV
IREEKVDVSEDGMKALVTLSSGDMRRALNILQSTHMAFEKVTEETVYTCTGHPLKSDIAN
ILDWMLNLDFTTAYRKIMALKTLKGLALHDILTEIHLFVHRVDFPPSVRIHLLTQMADIE
YRLSVGTSEKIQLSSLIAAFQVTRDLIVTDA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagctcacgggggccaagctcaggaacctgccctgggttgagaaataccggccacag
acactgaatgatctcatttctcatcaggacattctgagtacaattcagaaattcatcagc
gaggaccgcctgccgcatctgctgctctacgggcccccgggcaccgggaagacgtccacc
atccttgcctgtgccaagcagctgtacaaagagaaggaattcggctccatggttttagag
ctcaatgcttctgatgaccgaggaattgatatcgtccggggccccatcctgagctttgcc
agcacaaggaccatatttaaaaaaggctttaaactggtgattctggatgaagctgacgcc
atgacacaggatgcccagaatgccttgcgcagagtgatcgagaagttcacggaaaacacc
cgcttctgccttatctgtaactacctgtccaagatcatcccagcgctacaatcccgatgc
acgcggttccgcttcggcccgctgagccccgagctcatggtcccccgcctggaacacgtc
atcagggaagagaaagtggacgtgagtgaggacgggatgaaggctctggtgaccctctcc
agcggggacatgcggcgggcactgaacattctgcagagcacgcacatggccttcgagaag
gtaaccgaggagactgtctacacctgcacgggacacccgctaaaatccgacatcgcaaac
atcctggactggatgcttaacttggacttcaccacggcctacaggaaaatcatggcgctg
aagacactgaagggcctggccctgcacgatatcctcaccgagatccacttgtttgtgcac
agagtggacttcccaccatcagttcgcatacatctgctgacccagatggcagacatcgag
tacaggctctccgtgggcaccagcgagaagatacagctgagttccctcattgcagccttc
caggtcaccagagacttgatagttacagatgcctag
DBGET
integrated database retrieval system
