Suncus etruscus (white-toothed pygmy shrew): 126030715
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Entry
126030715 CDS
T09902
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
126030715 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126030715 (DEPDC5)
Membrane trafficking [BR:
setr04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
126030715 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
126030715
NCBI-ProteinID:
XP_049644874
LinkDB
All DBs
Position
15:35171497..35353322
Genome browser
AA seq
1592 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDEFPEVNRA
SIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKDGRDTSLGTPKESENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERENHSRKSSSFCDVSSSPSLPSRVLPTEEVRSQASDDSSLGRSTNILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMVELQGSGQRDPTHSSAELLE
LAYHEAAGRHSTSRQPGDGMSFLNFSGPEELSVSLLSSNGTGMNPRTQNKDSLEDNVSTS
PDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADMDRRDEE
GVQMTAQQVFEEFICQRLMQGYQIIVQPKAPKPSPAVPPPLSSSPLYSRGLVSRNRPEEE
DQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVSCWVEFS
HERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGEAHCDIY
GDKPRADEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGTTMKGLQMPGPIATHSLEST
GPPVGKKGTSVLSALLEMEASQKCMGEQQAAVHSGKSSTQPAESSNVAMTPTYVDSPRKD
GAFFMEFVRSPRTASSSFYPQVSVDQTAAPLLDSSSLGISAGQSVDRVNSQTVGNSQNTG
EQGFTSTNPSESSFQQLAASSLTSSSTLAEILEAMKHPSTGIQLLSEQKGLSPCCFISAE
VVHWLVNNVDGVQTQAMAIDIMQKMLEEQLITHASGEVWRTFIYGFYFYKIVMDKEPDRG
ALQQPTWHTTAVDDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPASYASRHSSFS
RSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWM
AVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLLKE
GSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFL
QLPYSKRKFSGQQRRRRNSTSSTSQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADR
LLKDFTDFCINRDNRLVTFWMSCLEKMHASAP
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctacaaactggtcatccacaagaagggcttcgggggcagtgat
gatgagctggttgtgaaccccaaagtgtttcctcacatcaagcttggggacattgtggag
attgctcaccccaacgatgaatacagtcctctgctcttgcaagtcaagtcacttaaggaa
gatttacagaaagaaactatcagtgtggaccagacagtgactcaagtgtttcgtctaaga
ccttatcaagatgtctacgttaatgttgtagaccctaaggatgtgacacttgacctcgtg
gaattaacctttaaggatcaatatattggtcgtggggatatgtggcgattaaagaaaagt
ttggtcagcacatgtgcctatatcactcagaaggtggaatttgcaggcatcagggcccag
gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttatatcagtgaagataca
agggtggtgttccgatctacatcagctatggtttacatatttattcagatgagctgtgaa
atgtgggacttcgatatttatggggatctgtattttgagaaagctgtgaatggtttcctt
gctgatctttttaccaagtggaaggagaagaattgtagtcatgaagtgactgtggtcctg
ttttctagaactttctatgatgcaaaatctcttgatgaatttcctgaagtaaaccgagcc
tcaattcgacaggatcacaagggtcgattctatgaagatttttataaagtggttgtgcag
aatgagaggagagaagaatggacgtcactgcttgttactattaaaaaactcttcattcaa
tatccagtgttggttcgactggaacaggcagagggctttcctcaaggagataattctacc
tcagcacaaggaaactacctagaggccattaatctgtcattcaatgtgtttgataagcac
tacatcaaccgcaactttgaccggactggacagatgtctgtggtgatcacacctggggtg
ggtgtgtttgaagtggaccgcctactcatgatcttgaccaagcagcggatgatagacaat
ggaattggtgtggacttggtatgcatgggggagcaaccactacatgcagttccattgttc
aagctacataatcgaagtgcacctcgagattcccgtctgggcgatgactataatattcct
cattggataaatcatagtttttatacatccaaaagccagctcttttgtaacagttttaca
ccacgaataaaactggcaggaaagaagcctgcctctgagaaagcaaaagatggccgtgat
acatctcttggaactccaaaagaatctgagaatgcccttcccatccaagtggattatgat
gcctatgatgcacaggtgttcaggctgcctggcccatcgagggcacagcgcctcgccacc
tgcaggtctgttcgagagcgggagaatcacagtcggaagagcagcagcttctgtgatgtc
tcctccagtccttccctgcccagccgcgtgctgcccacagaggaagtgaggagccaggct
tctgatgacagttccctgggcaggagcaccaacatcctgatgatcccacacccccaccta
caccagtatgaagtcagcagttccttgggttacaccagcactcgagatgtcctggaaaac
atgatggagccacctcagcgagactccagtgcaccagggaggttccatgtaggcagtgcg
gaatccatgctacatgttcgccccgggggatacacgcctcaacgggcactgattaacccc
tttgctccttcacgaatgcctatgaagctcacatccaatcgaaggcgctggatgcacaca
tttcctgtaggaccatcgggagaggccatccagatccatcaccagacacgacagaatatg
gtggagctgcagggcagcgggcagagggacccaactcactcctctgcagagctgctggag
ttagcctatcatgaagctgctggaaggcacagcacttcccgccagcctggtgacggcatg
tccttcttgaacttcagtggaccggaagagctttctgtcagcctgcttagcagcaatggt
acaggtatgaatcctaggacccagaacaaagattcactagaggacaatgtttctacctct
ccagacccaatgccaggcttctgttgcacagttggagtggactggaagtctctcactact
ccggcttgcctccccctcaccaccgactacttccctgaccgccagggcctgcagaatgac
tatacagagggctgttatgatctcctcccggaagcagacatggataggagggatgaggag
ggtgtacagatgacagcccagcaggtgtttgaagaatttatctgccagcgcctcatgcag
ggctaccaaatcatagtgcagcccaaggccccaaaacccagccctgctgttccaccacca
ctgagcagcagtccactctatagccgaggccttgtgtcccggaaccgacctgaggaggag
gaccagtactggctgagtatgggcagaactttccacaaagtgacactgaaggataagatg
atcacagtgacacgatatcttcctaagtacccttatgaatctgcccagattcactataca
tacagcctctgtccttcccactctgactcagagtttgtctcttgctgggtggaattctct
catgaacggctggaggaatacaagtggaattacttagatcagtatatttgttctgctggc
tccgaggacttcagcttaattgagtctctgaaattctggagaacccgcttcctgctgctg
ccagcctgtgtcactgccaccaagcgcatcacagagggcgaggcacactgtgacatctat
ggggacaagccccgggcggatgaagaggagtggcaactcctggacggcttcattcgcttt
gtggagggcctaaaccggattcgtcggcgccatcgttcggatcgcatgatccggaagggg
accaccatgaaaggcttgcagatgcctggacccattgccacccactccctcgagtcaact
ggccctcctgttggcaaaaagggaacttcagtgttgtctgccctgttggagatggaggcc
agtcaaaagtgcatgggagaacagcaggcagcagtgcacagtggcaagagctccacccag
ccagctgagagcagtaacgttgctatgacgcccacctacgtggatagcccacgaaaggat
ggggccttctttatggagtttgtccgcagccctcgaacagcatcatcctccttctaccca
caggtatctgtggaccagacagctgcaccactgctggacagctccagtttgggcataagt
gcaggccagtctgtggacagagtcaacagccagactgttgggaattcccagaacacggga
gaacagggcttcacctccacaaaccccagtgagagcagctttcagcagctggctgcaagc
tcactgacatcttcctctaccctggccgagatcctggaagccatgaaacacccctcgaca
ggcatccagctgctctctgaacagaagggcctctcgccatgctgcttcatcagtgcagag
gtggtgcactggctggtgaacaacgtggatggggtgcagacgcaggccatggccatcgac
atcatgcagaaaatgctggaagagcagctcatcacgcatgcatctggggaagtctggcgg
acatttatctacggcttctatttctacaagatagtaatggacaaagaacccgaccgaggg
gccctacagcaacccacctggcacacgacagctgtggacgatttcgccagcttccagcgc
aagtggtttgaagtggcctttgtggctgaagagctcctgcactcagagatccccgctttc
ctgctgccatggctgcctagcagacccgcctcgtatgcaagcaggcacagctccttcagc
cggagctttggtggccggagccaggcagctgcactcttagctgccactgtccctgagcaa
aggacagtcaccctggatgtcgatgtgaacaaccgcaccgacaggctggaatggtgtagc
tgctattaccatggcaacttctccctgaacgcagcctttgagatcaagcttcactggatg
gcagtgaccgctgcggtcctctttgagatggtccagggctggcatcggaaagccacctcc
tgtggctttttgttagtccccgttttggagggaccctttgcactgccgagttacttgtac
ggcgatccactgagagctcagctcttcatccctctcaacatcagctgcctgctcaaggag
ggcagcgagcacctgtttgacagttttgagccagaaacatactgggatcgaatgcacctt
ttccaggaagccatagcacacaggtttgggtttgtgcaagataaatattctgcctctgca
tttaactttcctgctgagaacaagcctcagtacatccatgttacaggaacagtcttcctg
caactgccctactccaagcgcaagttctcaggtcagcagcggcggcggcgcaactccacc
agctccactagccagaacatgttctgtgaggagcgggtgggctacaactgggcctacaac
accatgctgaccaagacgtggcgctccagtgccacgggagatgagaagttcgccgaccgg
ctgctcaaggacttcacggacttttgtatcaaccgtgacaaccgcctggtcacattctgg
atgagttgcctggagaagatgcatgccagtgccccgtga
DBGET
integrated database retrieval system
