Suncus etruscus (white-toothed pygmy shrew): 126030733
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Entry
126030733 CDS
T09902
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126030733 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
126030733 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126030733 (THOC5)
03041 Spliceosome [BR:
setr03041
]
126030733 (THOC5)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126030733 (THOC5)
Spliceosome [BR:
setr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126030733 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
126030733
NCBI-ProteinID:
XP_049644926
LinkDB
All DBs
Position
15:33582536..33627359
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AA seq
695 aa
AA seq
DB search
MSSESSKKRKPKVIRSEGAPNEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDMAVEIEDRRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSIEEFYMEAPPEISNAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRESLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYEIARHLPPPLYVLFVQATAYGQACAHMKPSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSVIHLTFYYLMNLNIMTVKAKVTTASELITPLSAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLRDYVLELGHPYLWVQKLGGLHFPKEQPQHTVVMDHSLSA
SHMETTMKLLKTRVQSRMALHKQFASLEHGIVPVTSDCQHLFPVKVVSRLVKWVTLAYED
YLELPFTKDIVEAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSFPPIFQLCLNWKGE
KTNSNDDNIRAMESEVNVCFKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
KEFPQEKMCLRLFRYRVGVNVGFRSLLFWGLYTLG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagcaaaaaacgtaagcccaaggtgatccgaagtgaaggagcccca
aatgaagggaagcgtaaccgatctgacactgaacaggaaggtaaatactacagtgaggag
gctgaagtagacctgcgggaccctggcagagactatgaactgtacaagtacacatgccag
gagctacagaggcttatggctgaaatccaggacctgaaaagccggggaggcaaggacatg
gcagttgagatcgaagaccggagggtccagagttgtgtgcacttcatgactctaaagaaa
cttaaccgattagcccatatcaggttgaagaaaggaagagatcagacccatgaggctaaa
cagaaagtagacgcttatcaccttcagctccagaacctattgtatgaggtgatgcacctg
cagaaggagatcaccaagtgcctggaatttaaatcgaagcatgaagaaatcgatctggtt
agtatagaggaattttacatggaggctccgccagaaatcagcaatgctgaagttaccatg
ggagatcctcaccagcaaaccctagcacgtctggactgggagctagagcagcggaaaagg
ctggcagagaagtaccgagagtccctatccaacaaggagaagatcctcaaggagattgag
gtgaagaaggagtacctgagcagcctccagccccgcctcaacagcattatgcaggcatcc
ctcccagtgcaggagtacctgttcatgccatttgaccaggctcacaagcagtatgaaatt
gccagacacctgccgccacccctctatgttctctttgtccaggccactgcttacgggcag
gcttgtgctcatatgaaaccctctcagccccctagacaggataagacgttgtccgtggca
atcgaaggcagtgtggatgaagccaaggctttgtttaagcctcccgaggattcccaagac
gatgaaagtgactctgatgctgaagaggaacaaactacgaaacgccgtcgacccacgctg
ggagttcagttggatgacaagcgaaaggagatgctaaagaggcaccccctgtctgtcatg
ctggacctgaaatgcaaagatgacagtgtgattcacctgactttctattacctcatgaac
ctcaacatcatgacagtaaaagccaaagtgactacagcgtcggagctgatcacgccctta
agtgcaggggatttgctatcgcctgactcagtcctgagctgtctgtatcctggggatcac
ggaaagaaaactccaaacccagccaatcagtatcagtttgataaagttggcatcctgacc
ttgagagactatgtacttgagctaggtcacccttatttgtgggtacagaagttgggtggc
ctccacttccccaaagagcagccccagcacactgtggtcatggaccattccctgagtgcc
agccacatggagaccaccatgaagttgctgaaaaccagagtgcagtctcgcatggccctc
cacaaacagtttgcatctctggaacatggcattgtaccagttaccagtgactgccagcac
ctctttcctgtaaaggttgtctctcgcctggtgaagtgggtgactcttgcttatgaagat
tacctggagctacctttcaccaaggacattgtggaggcaggactggctgaggacaccaat
ctctactacatggcacttgtggagaggggcacagccaaactacaagctgctgtagttttg
aatcctggatactcttcttttccacccatcttccaactttgtctgaactggaaaggggaa
aaaaccaacagcaatgatgacaatattcgggccatggagagcgaggtcaatgtgtgcttt
aaggagttgtgcggcccgcggcccagccaccagctcttgaccaaccagttgcagcgactg
tgtgtgcttctggatgtctacctggagaccgagagccatgacgacagtgtggaggggccc
aaggaatttccgcaggagaagatgtgccttcggctttttaggtacagggtcggtgtgaat
gttggttttaggagcctcctcttctggggcctgtataccttgggctga
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