Suncus etruscus (white-toothed pygmy shrew): 126030823
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Entry
126030823 CDS
T09902
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082
ATP-dependent chromatin remodeling
setr04714
Thermogenesis
setr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126030823 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
126030823 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
126030823 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126030823 (SMARCA4)
03036 Chromosome and associated proteins [BR:
setr03036
]
126030823 (SMARCA4)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126030823 (SMARCA4)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126030823 (SMARCA4)
Chromatin remodeling factors
BAF complex
126030823 (SMARCA4)
PBAF complex
126030823 (SMARCA4)
GBAF(ncBAF) complex
126030823 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
126030823
NCBI-ProteinID:
XP_049645013
LinkDB
All DBs
Position
15:90251697..90274470
Genome browser
AA seq
1609 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPISTPG
PGGYPQDNMHQLHKPMESMHEKGLSDDPRYSQMKGLGLRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMASGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPLPGMQQQMPALPPPSVSAPGPGAGPGPAPPN
YSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPDGPLANAAAPTSTPQKLIPPQPT
GRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRVTPIQKPRGLDPVEILQ
EREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDT
ALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKE
YHRSVTGKVQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDK
RLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE
TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE
EEEEQPPPAQPPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGL
QSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ
TIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQL
RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL
LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRL
HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKG
KGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI
LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE
YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDET
VNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPAWIIKDDAEVERLTCEE
EEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRESD
AGPSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSG
RQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQT
FNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIK
LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSASGSEED
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccgccactgggcgggacccctcggcccggcccttcccctggccct
gggccctccccaggtgccatgctgggccctagccctgggccatcccccggctcggcccac
agcatgatgggacctagcccaggccccccatcagcaggacaccccatctccacaccgggg
cctggcgggtatccgcaggacaacatgcaccagctgcacaagccaatggagtccatgcac
gagaagggcctgtccgacgacccccgctacagccagatgaaggggctggggctgcggtca
ggaggccatgctgggatggggccccctccgagccccatggaccagcactcgcaaggttac
ccctcgcccctgggcggctccgagcacgcctccagcccggtgcccgccagcggcccctcc
tctggcccccagatggcgtcggggcccgggggtgccccgctggacggcgccgaccctcag
gccttgggccagcagaaccggggcccgaccccattcaaccagaaccagctgcaccagctg
cgggcgcagatcatggcctacaagatgctggcgcgggggcagccgctgcccgaccacctg
caaatggctgtgcagggcaagcggcccctcccgggcatgcagcagcagatgcccgcgctg
ccaccaccctccgtatctgcccctggccccggtgctggccccggccctgcgccccccaac
tacagtcgcccccatggcatgggcggccccaacatgcccccccctggaccctcgggtgtc
ccccccgggatgccaggccagcccccaggaggaccccccaagccctggcctgatggaccc
ctggccaatgctgctgcccccaccagcacgcctcagaagctaatccctcctcagcccacg
ggccgcccgtcccccgcaccccccgccgtgccacccgccgcctcacctgtgatgccgcca
cagacgcagtccccggggcagccagcccagcctgcgcctatggttcctctacaccagaag
cagagccgggtcactcccattcagaagccgaggggtctggaccctgtggagatcctacag
gagcgcgagtacaggctgcaggcccgcatcgcgcaccggattcaggagctggagaacctg
cccggctcgctggctggagaccttcggaccaaagccaccatcgagctcaaggctctccgg
ctgctcaacttccagaggcagctgcgacaggaggtggtggtgtgtatgcggcgggacacg
gccctggagacggcactcaatgccaaggcctacaagcgcagcaagcgccagtcactgcga
gaagcccgcatcaccgagaagctggagaagcagcagaagatcgagcaggagcgcaagcgc
cggcagaagcaccaggaatacctcaacagcatcctgcagcatgccaaggacttcaaggag
taccaccgctcagtgactggcaaggtgcagaagctgaccaaggccgtggccacctaccat
gccaacacggagcgtgagcagaagaaggagaacgagcgcatcgagaaagagcgcatgcgc
cggctcatggcggaggatgaagagggttaccgcaagctcatcgaccagaagaaggacaaa
cgcctggcctacctactacagcagacggatgagtacgtggccaacctcaccgagctggtg
cggcaacacaaggcagcgcaagtggccaaagagaagaaaaagaagaagaagaagaagaag
gcagagaacgctgagggccagacccccgccattgggccggatggggagcccttggatgag
acgagccagatgagcgacctgccggtgaaggtgatccacgtggagagtggcaagatcctc
actggcaccgacgcccccaaggcgggccagctggaggcctggctcgagatgaacccgggg
tacgaggtggccccgcggtcggacagtgaggaaagcgggtccgaggaggaagaagaggag
gaagaggaggaacagcccccgcctgcacagccacccgcactgcctgtggaagagaagaag
aagattccagaccctgacagcgacgacgtctccgaggtggacgcgcgtcacatcatcgag
aacgccaagcaggacgtggatgacgagtacggggtgtcacaggcgctggcacgtggcctg
cagtcctactacgcggtggcgcatgctgtcactgagcgcgtggacaagcagtcggcactg
atggtcaacggcgtgctcaagcagtaccagatcaagggcctggagtggctggtgtctttg
tacaacaacaacctgaacgggatcctggcggacgagatgggcctgggcaagaccatccag
accatcgcgctcatcacatacctcatggagcacaagcgcatcaacgggcccttcctcatc
attgtccccctctcgacactgtccaactgggcgtatgaattcgacaagtgggccccttcg
gtggtgaaggtgtcctataagggctccccggctgcccggcgcgcttttgtgccccagctc
cgcagcggcaagttcaacgtcctgctcacaacttacgagtacatcatcaaggacaagcac
atcttggccaagatccgctggaagtacatgatcgtggacgagggccaccgcatgaagaac
caccactgcaagttgacacaggtgctcaacacgcactacgtggcaccgcgccgcctgctg
ctcacgggaaccccgctgcagaacaagttgcccgagctctgggcgctgctcaacttccta
ctccctaccatcttcaagagctgtagcaccttcgagcagtggtttaatgcgcccttcgcc
atgaccggcgagaaggtggacctgaacgaggaggagaccatcctcatcattcggcgattg
cacaaggtgctgcggcctttcctgctgcggcgcctcaagaaagaggtggaggcacagctg
cccgagaaggttgagtacgtcatcaagtgtgacatgtcggcgctgcaacgggtactctac
cgccacatgcaagccaagggcgtcctgctcaccgacggctccgagaaggacaagaagggc
aagggcggcaccaagacactgatgaataccatcatgcagctacgaaagatctgcaaccac
ccctacatgttccagcacatcgaggagtccttctccgagcacttgggcttcaccggcggc
atcgtgcaggggctggacctctaccgcgcgtcgggcaaattcgaactgctggaccgcatc
ctgcccaagctgcgggccaccaaccacaaggtgctgctgttctgccagatgacatcactc
atgaccatcatggaggactacttcgcctaccgtggcttcaagtacctccggctggacggc
accaccaaggcggaggaccgaggaatgctgctgaagaccttcaacgagccgggctctgag
tacttcatcttcctgctcagcacgcgtgccggtggcctgggcctcaacctgcagtcggcg
gataccgtcatcatctttgacagcgactggaacccacaccaggacctgcaagctcaggac
cgtgcccaccgcattgggcagcagaacgaggtgcgggtgttgcgtctctgcaccgtcaac
agcgtggaagagaagatcctggcagccgccaagtacaagctcaacgtggaccagaaggtg
atccaggccggcatgttcgaccagaagtcctcaagccacgagcgccgggccttcctgcag
gccatcctggagcacgaggagcaggacgaggaggaagatgaggtgcctgacgatgagaca
gtcaaccagatgatcgcgaggcatgaagaggagtttgacctgttcatgcgcatggacctg
gaccgcagacgcgaagaggcccgcaaccccaagcggaagccgagactcatggaggaggac
gagctgccggcctggatcatcaaggatgatgccgaggtggagcggttgacgtgcgaagag
gaagaggagaagatgttcgggcgtggctcgcgccatcgcaaggaggtggactacagcgac
tcactgactgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctggag
gagatcgaagaggaggtccggcagaagaaatcgtcgcgcaaacgcaagcgggagagcgat
gcgggcccatccacgcccaccaccagcactcgaagccgggacaaggacgaggagagcaag
aagcagaagaagcgcgggcggccgccggctgagaagctctcgcccaacccgcccaacctc
accaagaagatgaagaagatcgtggacgccgttatcaagtacaaggacagtagcagcggc
cgacagttgagcgaggtcttcatccagctgccctcgcgcaaggagctgcccgagtattac
gagctcatccgcaagcccgtggacttcaagaagatcaaggagcgcatccgcaaccacaag
taccgcagcctcaacgacctggagaaggatgtgatgttgctgtgccagaatgcacagacc
ttcaacctggagggctcactgatctacgaagactccatcgtgctgcagtcggtgttcacc
agcgtgcggcagaaaatcgagaaggaggacgacagcgagggcgaggagagcgaagaggag
gaggagggcgaagaggaaggctccgaatctgagtcccgctcagtgaaggtgaagatcaag
ctgggccgcaaggagaaggcgcaggaccggctcaaggggggccggcggcggccgagccgg
gggtcccgggccaagcccgtggtgagcgacgatgacagtgaggaagaacaggaggaggac
cgatcagcaagtggcagtgaagaagactga
DBGET
integrated database retrieval system
