Suncus etruscus (white-toothed pygmy shrew): 126030835
Help
Entry
126030835 CDS
T09902
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126030835 (ZSWIM8)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
126030835 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
126030835
NCBI-ProteinID:
XP_049645029
LinkDB
All DBs
Position
15:complement(51378884..51394037)
Genome browser
AA seq
1900 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGGGGGARTRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEED
IRLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPQGAYNVAVMFD
RCRVTSCSCTCGDGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYL
ISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIK
KTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFK
RRDSNAAPLLEILTDQCLAYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASM
CDEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAV
EACYFNWEEAYPLPGVTYSGTDRKLALSWARALPPRPGAARTGGLEESRERPRVPPAEPA
VRPKEPGAKRKGLGEGVPSSQRASRRLSAEGGDKVLHKMGPGGGKAKSLGGASSGSKGPA
GGGSKRRLSSEDSSLELDLAEMSLDDSSLALGAEASTFGGFPESLPPCTTSGGSRGPSAF
LPEPSDTYEEDGGVYFSEGPEPPVASVGPPGLLPGEVCAHSDSPMTDEGGRAPPKTKEAA
PATGEEDDDYQAYYLNTQDGAGGEEEKADGMAGEEHDLFAGLKPLEQESRMEVLFACAEA
LHAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAF
LLTVLSERSEHHNLAFRVGMFALELQRPPASTKALEVKLAHQESEVAALLKKIPRGPSEM
STMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPNRSWNNEMPGDEE
LGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGNLALALMITYKDDQTKLKKILDKLLDR
ESQTHKPQTLSSFYSSSRPAAASQRSPSKHGPPAAPGALQPLASGSSGPAQPGSVAGAGT
GPPEGFTEKSVPESSPHSTCEGLPAEMAVTPRPEGKVPSRLALGNRGGYNGRGWGSPGRP
KKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSS
SSGSRRASASGGARAKTVDVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGG
NSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQ
AMEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNP
NEIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTA
REGATSCSASGIRAAGEAGRGLPEGRGAPGTEPVTVAAAAVTAAATVVPVISVGSSLYPS
PGLGHSHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPLPHMPRPAVFPVPSSAYPQGVHP
AFLGAQYPYSVTPPSLAATAVSFPVPSMTPITVHPYHTESGLPLPTSVACELWGQGAVSS
VHPAPAFPAIQGSSLPALTTQPSPLVSGGFPPPEEEAHSQPVSPHNLHHLHAAYRVGMLA
LEMLGRRAPNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDTAAAEPCSRPQPPAGPGL
PPAGAALPAGIHAVYPPPPDPPDARRLRRLCERDLQCAQRLLPDAHGHDAVQRHPAEPQA
QQADQGTVAAGLPRDDHLLPLRLAPAVPFTGTQACSFGGHEPWPDSSSFGSLVAQTGSCS
LAVAWGQDISDPRNFGLGEMALSGRGHWVASGIYLAFINI
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggcgagcgcttctccttcgaggactcggac
cgcttcgaggaggactcgctgtgctccttcatctccgaggccgagagcctgtgtcagaac
tggcggggctggcgcaagcagtcggcggggcccaactcgcccacgggcggcggcggcggc
gggggcggcggcggcggggcccgcacgcgagatggtctggtgatcccattggtagagctg
tcagcaaagcaggtggcattccacataccattcgaagtggtggagaaagtttaccctcca
gtgcctgagcagctccagctccggattgctttttggagcttcccagaaaatgaggaggat
attcggctgtattcctgcctggccaatggcagtgcagatgaattccagcgaggtgatcag
ctgttccgcatgagggctgtgaaggacccgttgcaaatagggttccatctgagtgccacc
gtggtaccgccccagatggtccctccacaaggagcctacaatgttgctgtgatgtttgac
cgttgccgggtcacttcctgcagttgtacctgtggggatggggccaaatggtgtacacac
gtcgtggccctctgtctctttcgcattcataatgcctctgcagtctgcctgcgtgcccca
gtctctgagtctctgtctcggctgcagagggatcagctgcagaagttcgcccagtacctc
attagtgagcttcctcagcagatcctccccacagcgcagcgtctcctagatgaacttctg
tcctctcagtcaacagctatcaacacagtgtgtggcgccccagaccccacagcaggtcct
tcagcctctgaccagagtacttggtacttagacgaatcaacactcacagacaacatcaag
aagaccctacacaagttctgtggcccatcccctgtggtcttcagtgacgtgaactctatg
tatttgtcttccactgagcctccggccgctgctgagtgggcatgtctgctgcggcctttg
aggggccgggagcctgagggtgtctggaatctgcttagtatcgtgcgggagatgttcaag
cgccgggacagcaatgcggctcccctgctggagatcctcacggaccagtgcctcgcttac
gagcagattacgggctggtggtacagcgtgcgtacttcagcctcacatagcagtgccagt
gggcacacgggccgtagcaatggacagtcggaagtggcagcccatgcatgtgccagcatg
tgtgacgaaatggtcaccttgtggagactggctgtgctggatcctgcactcagccctcag
cgccgccgggaactatgtgcacagctgcgccagtggcagctgaaggtgatcgagaacgtg
aagcggggacagcacaaaaagaccttggagcggctcttccctggtttccggccggcagtt
gaggcctgctactttaactgggaggaggcctacccactgcccggtgtcacctacagtggc
actgaccggaagcttgcactgtcctgggcccgagccctgccgcctcggccaggggctgcc
cgcactgggggcctggaggaatcccgggagcggccccgagtgcctcctgcggagccagca
gttcggcccaaggagccaggggccaaacgaaagggcttgggtgaaggggtaccctcgtca
cagagggcttcccgccgcctatcagctgaggggggagacaaggtgctgcataagatgggg
ccaggtgggggcaaagccaagtccttggggggggccagcagtgggagcaaaggtccagct
ggaggtgggagcaagcggcggctgagcagtgaggacagttccctggagctagacctggcc
gagatgagcttggatgacagcagcttggccctgggcgctgaagccagcacttttggtgga
ttccctgagagcttgccgccctgcacaacctctgggggctctcgaggcccttctgccttc
cttcctgaaccctcagatacttatgaagaagatggtggtgtatacttctccgaagggccc
gagcctcctgtagcctctgtgggccccccaggcctactgccaggggaggtttgtgctcac
agtgacagccctatgacagatgagggtggtagggcacctcccaaaaccaaagaggctgcc
cctgccacaggggaggaggacgatgactaccaggcctattacctaaatacccaggatggc
gctggaggtgaggaggagaaggctgatggaatggctggggaggagcacgacctgtttgca
ggactgaagcctctggagcaggagagccgcatggaggtcctgtttgcttgtgctgaggcc
ctgcatgctcatggctacagtagcgaggcctctcgcctcactgtggagcttgcccaggac
ttgttggccaacccgcctgacctcaaggtagagcctcccccggccaagggcaagaagaac
aaagtctccactagccgtcagacatgggtagctaccaacactctgaccaaggcagctttc
ctgttaacagtgctcagtgagcgatcagagcaccacaacctggccttccgagttggcatg
tttgccttggagctgcagcgacccccagcttctaccaaagccttggaggtgaagctggca
caccaggaatctgaagtggctgctctgcttaaaaagattccacggggtcccagtgagatg
agcaccatgcgatgccgggccgaggagctccgggaagggacattgtgtgactatcggcca
gtgctacctctcatgttggctagtttcatctttgatgttctctgtgctccagtggtttct
cccacaggctcccggcccccaaatcgaagctggaataatgagatgcctggggatgaagag
ctgggatttgaagctgcagttgctgccttgggtatgaagacaacagttagtgaagcggag
catcccctcttgtgtgaaggtacccggcgggaaaagggcaacctggcgttggcacttatg
atcacgtataaggatgaccagaccaagctcaaaaagatcttagacaagctcttggatcga
gagagccaaacccataagcctcagacgctgagttcattctactcctcaagtcgccctgct
gcagccagccagagatctccttcaaagcatggtcccccagctgctccaggggctttgcag
ccattggcctctggctcctcagggcctgctcagccaggcagcgtcgctggagctgggaca
ggcccccctgagggcttcacagagaaaagtgtgcctgagagttcaccccattctacctgt
gaggggctgcctgctgagatggctgtgactccaaggccagaggggaaagtccccagtcgc
ctggcacttggtaatcgtggcggttacaacggacgtggctggggttccccagggcgacca
aagaagaagcacacaggcatggccagcattgacagcagtgcccccgaaacaacatcagac
agttcccccaccttaagtcggaggccacttcgcgggggctgggcccctacgtcctggggt
cgaggccaagacagtgacagcatcagcagctcgtcctcagactccctgggctcttcatcc
tccagtggcagccgccgggccagcgccagtggaggagctcgggccaagacagtcgatgtg
ggcaggtataagggccgccgtcctgagagccatgcaccccatgttcccaatcagccgtct
gaggcagctgcacacttctattttgagctggccaagacggtgctgatcaaggcaggggga
aacagcagcacctccatcttcacacacccgtcatcctcagggggccaccagggcccccat
cgcaacctacacctgtgcgccttcgagattggcctttacgccctcggcctgcacaacttt
gtgtctcctaactggctctcacgtacctactcctcccatgtgtcctggatcacaggtcag
gccatggagattggcagtgcagccctgaccatcctggtggagtgctgggatgggcacctg
actccccctgaggttgcatccctagctgacagggcatcacgggctcgtgactccaacatg
gtgagggcagcggcagagctggccctcagctgcctgcctcatgctcatgccctgaatccg
aatgagatccagcgggccctggttcagtgcaaggaacaggacaacctgatgttggagaag
gcctgcatggcagtggaggaggctgctaagggtgggggcgtgtaccccgaagtgttgttt
gaggttgctcaccagtggttctggctatatgagcaaacagcaggtggttcatccactgcc
cgtgaaggggcaacaagctgtagtgccagtgggatcagggcagcaggggaggcggggcgg
gggttgcctgagggcaggggggcccctggcactgagccagttacagtggcggcagcggca
gtgacagcggcagccacagtggtgccagtcatttcggtggggtccagtttatatccgagt
ccaggattggggcacagtcactcccctggcctgcacccctacactgccctccagccccac
ctgccctgtagccctcagtacctcacacatccagctcaccctgcccaccccctgccgcat
atgccccggcctgctgtcttccctgtgcccagctctgcgtacccacagggtgtacatcct
gcattcctgggggcccagtacccctactcagtgacgcccccctcacttgctgccacagct
gtgtctttccccgtcccttccatgacacctatcacagtacatccctaccacacagagtca
gggctcccactgcctaccagtgtggcctgtgagttgtgggggcagggagcagtgagcagc
gtgcacccggcccctgccttcccggccatccagggcagctccttgccggctctgaccaca
cagccgagtcctttggtgagcggcggcttcccaccacctgaggaggaggcccacagccag
ccggtcagcccacacaacctacaccacctgcacgctgcctaccgtgtcggaatgctagca
ctggagatgctgggccgtcgggcacctaacgatcaccccaacaacttctcccgctctccc
ccctacactgatgatgtcaaatggttgctggggctggcagcaaagctgggagatcgtcat
ggagacactgcagcggctgagccctgctcacgcccacaaccacctgcgggccccggcctt
ccaccagctggtgcagcgctgccagcaggcatacatgcagtatatccaccaccgcctgat
ccacctgacgcccgcagactacgacgactttgtgaacgcgatctgcagtgcgcgcagcgc
cttctgcctgacgcccatgggcatgatgcagttcaacgacatcctgcagaacctcaagcg
cagcaagcagaccaaggaactgtggcggcgggtctccctcgagatgaccaccttctcccc
ctgaggctggcccctgcagtacccttcacggggacacaagcctgcagctttggggggcat
gagccatggccagacagctcctcgtttggctccttggtcgcccagactggcagctgctca
ttggccgtagcttggggccaagatatctcagatcctagaaactttgggctgggggagatg
gccctgtctgggagggggcactgggtggcctccggtatttatttggcatttataaatata
taa
DBGET
integrated database retrieval system
