Suncus etruscus (white-toothed pygmy shrew): 126030845
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Entry
126030845 CDS
T09902
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04510
Focal adhesion
setr04520
Adherens junction
setr04670
Leukocyte transendothelial migration
setr04810
Regulation of actin cytoskeleton
setr04820
Cytoskeleton in muscle cells
setr05100
Bacterial invasion of epithelial cells
setr05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126030845 (VCL)
04520 Adherens junction
126030845 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
126030845 (VCL)
04810 Regulation of actin cytoskeleton
126030845 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
126030845 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
126030845 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
126030845 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126030845 (VCL)
04147 Exosome [BR:
setr04147
]
126030845 (VCL)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126030845 (VCL)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126030845 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
126030845
NCBI-ProteinID:
XP_049645046
LinkDB
All DBs
Position
15:complement(51034047..51141948)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAHMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIYVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPGASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAELRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQTIAKKIDSAQNWLADPNGGPEGEEQIRGALTEARKIAE
LCDDPKERDDILRSLGEISALTSKLTDLRRQGKGDSPEARALAKQVATALQNLQSKTNRA
VANSRPTKAAVHLEGKIEQAHRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKSRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDVPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSIVEG
IQSSVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVARVREAFQPQEP
EFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEDKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacacgcacgatcgagagcatcttggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggagggcgaggtggacggcaaagccatcccggacctc
acggcgcccgtggccgcggtgcaggcggccgtcagcaacctggtccgggttggaaaggaa
actgtgcagacaacggaggatcagattttgaagagagatatgccaccagcctttattaag
gttgagaacgcttgtaccaagcttgtccaagctgctcacatgctccagtcggacccttac
tcagtgcctgctcgggattatctcatcgatgggtccagggggatcctgtcaggcacatct
gacctgctgctcaccttcgacgaggctgaggtgcgcaaaattatcagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggagactatggaagatttggttacctac
accaagaatctggggcctggaatgaccaagatggccaagatgattgatgaacggcagcag
gagttgacgcaccaggagcaccgtgtgatgctggtgaattccatgaacactgtcaaggag
ctactccctgtgctcatatcagccatgaagatttacgtaacaacaaaaaactcaaagaac
caagggatcgaagaagccttgaaaaaccgcaatttcactgtggaaaagatgagtgcggaa
ataaatgagatcattcgtgtgctacaacttacttcctgggatgaagatgcttgggctagc
aaggacacggaagccatgaagagagctctggcctccattgactctaaactgaaccaggcc
aaaggctggctacgagaccccggtgcatccccaggagatgccggtgagcaggccatccgg
cagatcttggatgaagcgggaaaagtcggtgaactctgtgccggcaaagaacgcagggag
atccttggaacttgcaaaatgctggggcagatgacggatcaggtggctgagctccgagcc
aggggccaaggagcctccccggtggccatgcagaaagcccagcaggtgtcccaggggctg
gatgtgctcactgcgaaggtggagaatgcagcccgcaagctggaggccatgacaaactcc
aagcagaccatagcaaagaagattgattccgctcagaactggcttgcagaccccaacggg
gggcctgaaggagaagaacagattcgaggggctctgactgaagctcggaaaatagcggag
ttatgtgatgaccctaaggagagagacgacattcttcgttctcttggggaaatatctgcc
ctgacttctaaattaacagatctacgccgacaggggaaaggagattccccagaggcccgg
gctttggccaaacaagtggccactgccttgcagaacctacagagcaaaaccaatagggcc
gtggccaacagcaggcccactaaagccgcagttcaccttgagggcaagatcgagcaagct
catcggtggattgataaccccacagtggacgatcggggagtaggtcaagctgctattcga
gggcttgtggctgaagggcaccggctggctaatgtcatgatgggaccttatcgccaagac
cttctagcaaaatgtgaccgagtggaccagctgacagcgcagctggctgatctggctgcc
agaggggaaggggagagtccccaggcgagagcacttgcttcccagcttcaagattcattg
aaggacctgaaatcacggatgcaagaggccatgactcaggaggtgtctgatgttttcagt
gataccacgactcccatcaagctgctggcggtggcagccactgctcctcctgatgtgccc
aacagggaagaggtatttgatgaaagagcagccaactttgagaatcactctggacgactc
ggggccactgcagagaaggcagctgctgtggggacagcaaataagtctatcgtggaaggg
atccagtcgtctgtgaagacggcccgagaacttactcctcaggtcgtctccgcggcccga
atcctgctcaggaaccctggcaatcaagctgcttatgaacattttgagaccatgaaaaac
cagtggatcgataacgtggagaagatgacaggactggtggacgaagctatcgacaccaag
tcactgttggatgcttctgaagaagcgattaaaaaggacctggacaagtgtaaggtcgcc
atggccaacatgcagccacagatgctggttgctggcgccaccagcattgctcgtagggcc
aaccggattctgctggtggccaagagggaagtggagaactctgaggaccccaagttccgg
gaggctgtgaaagctgcctcggatgaactgagcaaaaccatctcgccaatggtgatggat
gccaaagctgtggcaggcaacatctctgacccaggactgcaaaagagcttcttagattcg
ggataccgaatcctgggggctgtggccagggtgcgagaagccttccagccccaggagccc
gagttcccaccaccgccgcctgatctggagcagctgcggctgacagatgagcttgcgcct
cccaaaccaccgctacctgagggagaggtccccccacccaggcccccgccgcctgaggac
aaggatgaggaattccccgagcagaaagctggggaggtgattaatcagcccatgatgatg
gctgcacggcagctccacgatgaagctcgaaaatggtccagcaagggcaatgacatcatc
gctgcggccaagcgaatggctctgctgatggctgagatgtctcggctggtacgagggggc
agcggtaccaagcgggcactgatccaatgtgccaaggacatcgccaaggcctcagacgaa
gtgactcggctggccaaagaagttgccaagcagtgcacagacaagcggatcagaaccaac
ctcctacaggtgtgcgagcgcatccccaccatcagcacccagctcaaaatcctgtccaca
gtgaaggccaccatgctgggccggaccaacatcagcgacgaggagtcagagcaggccaca
gagatgctggttcacaatgcccagaacctcatgcagtcagtaaaggaaacggtccgagaa
gccgaggctgcgtccatcaagatccgcacagatgccggcttcacgctgcgttgggtccgg
aagaccccttggtaccagtag
DBGET
integrated database retrieval system
