Suncus etruscus (white-toothed pygmy shrew): 126030848
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Entry
126030848 CDS
T09902
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126030848 (RNF40)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126030848 (RNF40)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
126030848 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
BRE1
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
126030848
NCBI-ProteinID:
XP_049645051
LinkDB
All DBs
Position
15:complement(59507279..59528879)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSGPGNKRAAGDGGSGPPEKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLAE
RLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVETLLRHHENQGELSSG
TEVPGTQEGPVHDEILLTEPGTSELRDPLPVQLRPPLSEPALAFVVALGASSSEEVELQL
QGRMEFSKAAVSRVVEASDCLQRQVEGLCQRVYSRGDSELSNEGARARTRELGRENRRLQ
DLATQLQEKHHRISLEYSELQDKVTSSETKVLEMETTVEDLQWDIEKLRKREQKLNKHLA
EALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAELQ
GAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATKN
SHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINR
EMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSAHSIPSVGHPEDSSVS
TPVPGKEEGGPGPLGVPENRKELAAVPSAATTPSSMKKEEPLPAEDEVQAGTPGSQGPSS
RIREPEVRPKRELREREGPGLGAPSVASALSRADREKAKMEEAKRKEPELLKGLRAELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKKI
ADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLRE
KDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQGN
LGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREKE
SFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLT
KCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacccggcaacaaacgcgccgctggcgatgggggctcaggacccccggagaag
ctcagccgcgaggaaaagaccacgacgactctgatagagcccattcgtctcggaggcatt
tcctccacggaggaaatggacttgaaagttctgcagttcaagaacaagaaactagcagag
cgcttggagcagcgacaagcttgtgaagatgaacttcgagagcgaattgagaaactagag
aagcggcaggctaccgatgatgctactcttctcattgtcaatcgctactgggcccagctg
gatgaaactgtggaaacccttctccgacaccatgaaaaccagggggagctgtcttcaggg
acagaggtgcccggaacacaggaggggccagtgcatgatgaaattctactgactgagcca
gggacatcagaactgagggatcccctgccagtgcagttgcggcctcccctcagtgagcca
gctttggctttcgtggtggccctgggtgctagcagtagtgaggaggtagagctgcagcta
cagggccgtatggaattctccaaggcagcggtgtcccgtgttgtagaagcctcagactgc
ctgcagcgccaggtggagggactctgtcagcgagtatacagccgaggggacagtgagctg
tccaatgagggggctcgggcacgcacccgggagctgggccgtgagaaccgacgactacag
gacttggctacccagctacaggagaagcaccaccggatctctttggagtactctgagctc
caagacaaagtgacatcatcagagacaaaggtgctagagatggagactacagtagaggac
ctgcagtgggacattgagaagctgcgcaagcgtgagcagaagctcaataagcacctagca
gaggccttggagcaactcaactctggctactatgtgtctgggagctcctcaggcttccag
gggggtcaaatcacactcagcatgcagaagtttgagatgctgaatgcagagttagaagaa
aaccaagaattggccaacagccgcatggcagagctggagaagttgcaggccgaactccag
ggggctgtgcggactaatgagcgtctcaaggtggcccttcggagccttcctgaggaggta
gtacgggagacgggcgaatatcggatgctgcaggctcagttctcacttctctacaatgag
tctttgcaagtgaagacccagctggatgaggcccggggcctgttgctagccaccaagaat
tcccacctgaggcatattgagcatatggagagtgatgagctgggactacaaaagaagctg
cgtacagaggtgatccagctggaggacacgctggcccaggtacgaaaggagtatgagatg
ctgcgcatcgagtttgaacagaacctggcagccaatgagcaggcagggcccatcaaccgg
gagatgcgccacctgatcagcagcctccaaaaccataatcatcagctgaagggagacgcc
cagcggtataagcggaagcttcgggaagtacaggctgagatcggcaaactccgggcccag
gccagtggctctgcccattccatccccagtgtgggccatccagaggactctagtgtcagt
accccagttccagggaaagaagaaggagggccgggccctttaggtgtcccagagaacagg
aaggaattggcagcagtgcctagtgctgccactactccatcctcaatgaaaaaggaggag
cctctccctgcagaggacgaggtccaagctggcacccctggctcccaaggtccctcctcc
cggatccgagaacctgaggtcaggcccaagcgggagcttcgggagcgggaaggacctggc
ctgggagccccatcggtagcttcagctctctcacgggctgatcgggagaaggccaagatg
gaggaggccaagaggaaggagccagagctcctcaaaggtctccgagcagagctcaagaag
gcccaggaaagccagaaggagatgaaactgttgctggacatgtacaagtcagcgcccaag
gaacagcgggataaggtgcagctcatggcagctgaacgaaaggccaaggcagaggtcgat
gaattgcggagccgcatccgggaattggaggaaagagatagaagggagagcaagaagatt
gcagatgaagatgccctgcggcgtatacggcaagcagaggagcagatagaacatctgcaa
cggaagctgggagccaccaagcaggaggaggaggcactgctgtcagagatggatgtgaca
ggacaggcttttgaggacatgcaggagcaaaatgggcggcttcttcaacaattgcgggag
aaggatgatgccaactttaagctgatgtcagagcggatcaaggccaaccagatccacaag
ctactgcgcgaggagaaggatgagctgggagagcaggttctgggccttaagtcccaggtg
gatgcccagctgctgaccgtgcagaagttggaagagaaggagcgggccttacagggcaac
cttggtggtgtagagaaggagctgactctgcgcagccaggccctggagctcaacaagagg
aaggctgtggaagcagcgcagctggccgaggacctgaaggtgcagctggaacatgtgcag
acgagactgcgggagatccagccgtgcctggcagagagtagggcagctcgggagaaagaa
agcttcaacctcaagagggcacaggaggacatctcacgactgcggcgcaagctggagaag
cagaggaaggtagaggtttatgcagacgctgacgaaatcctccaggaagagatcaaggag
tacaaggcgcggctgacctgtccctgctgtaacacccgcaagaaggatgcagtccttact
aagtgcttccacgttttctgcttcgagtgtgtgcggggccgttatgaggcccgccagagg
aagtgccccaagtgcaacgcagcgtttggtgcccacgactttcatcgtgtctacatcagc
tga
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