Suncus etruscus (white-toothed pygmy shrew): 126030989
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Entry
126030989 CDS
T09902
Symbol
ITGAM
Name
(RefSeq) integrin alpha-M
KO
K06461
integrin alpha M
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04015
Rap1 signaling pathway
setr04145
Phagosome
setr04514
Cell adhesion molecule (CAM) interaction
setr04517
IgSF CAM signaling
setr04610
Complement and coagulation cascades
setr04613
Neutrophil extracellular trap formation
setr04640
Hematopoietic cell lineage
setr04670
Leukocyte transendothelial migration
setr04810
Regulation of actin cytoskeleton
setr05133
Pertussis
setr05134
Legionellosis
setr05140
Leishmaniasis
setr05146
Amoebiasis
setr05150
Staphylococcus aureus infection
setr05152
Tuberculosis
setr05202
Transcriptional misregulation in cancer
setr05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
126030989 (ITGAM)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
126030989 (ITGAM)
04517 IgSF CAM signaling
126030989 (ITGAM)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126030989 (ITGAM)
09142 Cell motility
04810 Regulation of actin cytoskeleton
126030989 (ITGAM)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
126030989 (ITGAM)
04610 Complement and coagulation cascades
126030989 (ITGAM)
04613 Neutrophil extracellular trap formation
126030989 (ITGAM)
04670 Leukocyte transendothelial migration
126030989 (ITGAM)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126030989 (ITGAM)
09162 Cancer: specific types
05221 Acute myeloid leukemia
126030989 (ITGAM)
09171 Infectious disease: bacterial
05133 Pertussis
126030989 (ITGAM)
05134 Legionellosis
126030989 (ITGAM)
05150 Staphylococcus aureus infection
126030989 (ITGAM)
05152 Tuberculosis
126030989 (ITGAM)
09174 Infectious disease: parasitic
05146 Amoebiasis
126030989 (ITGAM)
05140 Leishmaniasis
126030989 (ITGAM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126030989 (ITGAM)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126030989 (ITGAM)
04515 Cell adhesion molecules [BR:
setr04515
]
126030989 (ITGAM)
04090 CD molecules [BR:
setr04090
]
126030989 (ITGAM)
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126030989 (ITGAM)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
126030989 (ITGAM)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126030989 (ITGAM)
Cell adhesion molecules [BR:
setr04515
]
Integrins
Integrin alpha subunits
126030989 (ITGAM)
CD molecules [BR:
setr04090
]
Proteins
126030989 (ITGAM)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
126030989 (ITGAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
Integrin_alpha
FG-GAP_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
126030989
NCBI-ProteinID:
XP_049645217
LinkDB
All DBs
Position
15:complement(58943756..58992834)
Genome browser
AA seq
1155 aa
AA seq
DB search
MTCRVLLLTALALCHGFNLDTENAVIFQVNARGFGQNLVQFQESWVVVGAPQEITAVNET
GLLYKCDYSTSSCDPISLQVPQEAVNMSLGLSMTASSKPNQLLACGPTVHQMCKENTYIN
GFCFLFGPSLRNIERFPQVLRECPQQESDIAFLIDGSGSINPSDFQRMKEFVSTVMGQLK
KSNTLFSLMQYSERFETHFKFKDFKKNPDPRALVRPIRQLNGRTHTATAIRKVVRELFQS
SSGARENAIKILVVVTDGEKFGDSLDYKDVIPEAESQKIIRYVIGVGDAFNNERSRQELN
TIASKPARDHVFRVTNFEALNTIQNQLQEKIFAIEGTQTGSTSSFEYEMSQEGFSGAITS
TGPLLGAVGSFDWAGGAFLYNSKDTATFINTTRIDSDMNDAYLGYAAEVIVRNRVQSLVL
GAPRYQHTGLVVMFKQNSGVWENNSLIKGKQIGSYFGASLCSVDVNRDDSTDLVLIGAPH
YYEQTRGGQVSVCPLPRGRARWQCEEILQGEQGHPWGRFGAALTVLGDVNGDKLMDVAIG
APGEQENQGAVYIFHGTSGLGISPSHSQRITGSQFNPRLQYFGQSLSGGQDLTMDGLMDL
AVGAQGNALLLRSQPVVIVKVTMEFTPKEIVRKVFECQEQEVRDQLAGEAKVCLQIHKKT
QDRLRGEIQSILMYDLALDPNRPYPRAVFEKTKNNTFRQTQTLGLNRKCEMLKLQLPVCV
EDSVTPIVLRLNLTLMGKPLSSFGNVRPVLSMDAQRSFTELLPFEKNCGNDSVCQDDLSI
TFSFGNQKTLVVGGTRDINVLLTVKNEGEDSYRTQVTFFYPPGLSYRMVSRGQNPYSKRS
WRLVCESGVSTGESNALKNSSCSINHPIFPENSEVTFNVTFDVDSDAYLGKIFSLKANVT
SENNMSRTNKTEFQLALPVKYAVHMVVTSHETSTKYLNFTASETSKTIKHQYQFKNLGQR
HLPISVIFWIPILLKEKTVWKDPQVIFSPNITRNCTTEERNPPHLDVLAELKQTALLNCS
TAVCQRIQCDIQSFKVQEEFTVILNGTLLFDWYIKTSLNYIQLASMAEISFDDSSFALLP
GQEKFVKAQTQTKVEPYEVHDPVPLIVGSSVGGLVLLALITAGLYKLGFFKRQYKDMMNE
ATPPQATPPEATPPQ
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcagagtccttctattaacagccttggccttatgtcatgggttcaacctggac
actgaaaatgcagtgatcttccaagtgaatgccaggggctttggacagaacttggtccag
tttcaggaatcctgggtggtggtgggagccccccaagagataactgctgtcaacgaaaca
ggtctcctctacaagtgtgactacagcacaagcagctgtgatcctattagcctgcaggtt
ccccaagaggctgtgaacatgtccttgggcctgtccatgacagcgtccagcaaacccaat
cagctgctggcctgtggtcccaccgtgcaccaaatgtgtaaggagaacacatatataaat
ggtttctgctttctctttggaccctctttgaggaacattgagaggttcccacaggttcta
agagaatgccctcagcaagagagtgacatcgccttcttgattgatggctctggaagtatc
aacccaagcgactttcagcgaatgaaggagtttgtctcaactgtaatgggtcaactgaag
aagtccaataccttgttctctttaatgcagtattctgagagatttgagactcatttcaaa
tttaaagattttaagaaaaatcctgatcccagagcactggtgaggccaataagacaactg
aatggaaggacacacacagccacagcaatccgaaaagtggtaagagaactatttcaaagc
agcagtggagcccgggagaatgccattaagatcttagttgtcgtcacagatggagaaaag
tttggtgattccttggactataaggatgttattcctgaggcagagagtcagaagatcata
cgctatgtcattggggtcggagatgccttcaacaatgaaagatcccgccaagagcttaat
accattgcctccaagccagctcgtgatcatgtgtttcgggtgactaactttgaagctctg
aatactattcagaaccagcttcaggaaaaaatctttgcaatcgagggtactcagacagga
agtaccagctcttttgagtatgagatgtctcaggaaggcttcagtggtgccatcacttct
actggtcccttgctgggtgctgtggggagctttgactgggctggtggagcctttttgtac
aattcaaaagatacagccacctttattaacactaccaggatagattcagatatgaatgat
gcttacttgggttatgctgctgaagtcattgtgcgaaaccgggtacaaagcctggttctg
ggggcacccagatatcagcacactgggctggtagtgatgttcaaacagaattctggtgtc
tgggagaacaattctttaattaagggcaaacagattggctcctactttggggcctccctc
tgctctgtggatgtgaacagagatgacagcactgacctggttctcattggggccccccat
tactatgagcagacccggggaggacaggtgtctgtgtgccccttgccacgagggagggca
aggtggcaatgtgaagaaattctccaaggggagcaaggccacccctggggccgttttggg
gcagccttgacagtgctgggcgatgtaaatggagacaaactgatggatgtggctattggg
gccccaggagagcaggagaaccagggtgctgtctacatatttcatggaacctcaggcctg
ggcatcagcccttcccacagccagcgaatcacagggtcccagttcaatccaagactccag
tattttgggcaatcattgagtgggggccaggacctcaccatggatggattgatggatttg
gctgttggggctcagggaaatgcactactactcaggtcacagccagtggtaatagtcaaa
gtaaccatggagttcacacccaaggaaattgtaaggaaagtgtttgagtgtcaagaacag
gaagtgagagaccagcttgctggggaggccaaagtctgcctccaaatccacaagaaaaca
caggaccgactgagaggagagattcaaagcattctcatgtatgacttggctctggaccca
aatcgcccatatcctagggctgtctttgagaagacaaaaaacaacactttcagacaaaca
cagaccttggggctgaatcgcaaatgtgaaatgctgaagctacagttaccggtttgtgta
gaagattcagtgacccccattgtcttgcgcctcaacttgactctgatggggaaacccttg
tcctcctttgggaatgtccgtccagtgctatctatggatgctcaaagatccttcacggag
ttgcttccctttgagaagaattgtggcaatgacagtgtctgccaggatgatctcagcatc
accttcagttttgggaaccagaaaactctggtggtgggtggtacccgggacataaatgtg
ctgcttactgtgaaaaacgagggcgaggactcctacaggactcaggtcaccttcttctac
ccacctggattgtcctatcggatggtgtcaagaggccagaacccctactcaaagcgatcc
tggcgcctggtctgtgagtctggtgtctccactggagaatccaatgccttgaagaacagt
agctgcagcataaaccatcccattttcccagaaaactcagaggtcacctttaatgttaca
tttgatgtggactctgatgcttaccttggaaaaatattttccctcaaggccaatgtgacc
agtgaaaacaacatgtccaggaccaacaaaactgagttccagctggcactgcctgtaaaa
tatgcagttcacatggtggttaccagccatgaaacttctactaaatatctcaacttcaca
gcttcagagacaagcaagaccataaaacatcaataccagttcaaaaacttgggccagagg
cacctccccatcagtgttatcttttggatccccatcctgctgaaagagaaaactgtgtgg
aaagatcctcaggtcatcttttccccgaacattaccaggaactgcactactgaggagagg
aacccccctcacttggacgttttggcagagcttaaacagactgcactgttgaactgttcc
actgctgtctgccaaagaatacaatgtgatattcagtccttcaaggttcaggaagaattt
acagtcatcctcaatggcaccctcttgtttgattggtatatcaagacctcgttaaactat
atccagctagcaagcatggcagagatctcctttgatgattcttcttttgccttgcttcca
gggcaggagaagtttgtgaaggctcagacacagaccaaagtggagccatatgaagtgcat
gaccctgtgccacttattgtgggcagctcagtggggggactggtgctcttggccctcatc
actgctgggctgtacaagcttggtttcttcaagagacagtacaaggacatgatgaatgaa
gctaccccacctcaagctaccccacccgaagctaccccaccccagtaa
DBGET
integrated database retrieval system
