Suncus etruscus (white-toothed pygmy shrew): 126031011
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Entry
126031011 CDS
T09902
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126031011 (GIGYF1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126031011 (GIGYF1)
Surveillance factors
Other surveillance factors
126031011 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
PRTase_3
Motif
Other DBs
NCBI-GeneID:
126031011
NCBI-ProteinID:
XP_049645233
LinkDB
All DBs
Position
15:75128643..75135930
Genome browser
AA seq
1009 aa
AA seq
DB search
MAAETLNFGPEWLRALSGGSVASPPPSPAMPKYKLADYRYGREEMLALYIKEHKIPEELQ
DKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGTPLTSTSRGRVSA
RSRGRGRGDSCFYQRSIEEGEGAFGRNPREIQRSQSWDDRGERRFEKPARREGARSSFEE
SGTGPRKEHARSDSENWRSLREEQEGGDEGSWRLGAAPRRDADRWRSASPDGGPRSAGWR
EHGERRRKFDFDLRGDRGGCGDEEGRAGPGGAPSRRGPGPDGFEEDKDGLPEWCLDDEDE
EMGTFDASGAFLPLKKGPKEPIPEEQDLDFQGLEEEEEEPPEAPEQEGPEAGVKAPSPLP
SQEEQPGPTSPLPALGPLWGTPGEGDNTVEKDRPAAEADDMRQVQLSPAVGSPSGPPGDL
EDDEGLKRLQQEAEKLVASLQDSCLEEERFTAAMQAPGLRHSAVATALPLSHGAARKWFY
KDPQGEIQGPFTTQEMAEWFQAGYFSMALLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSP
PPLLGNLDQERLKKQQELAAAALYQQLQHQQFLQLVNSRQLPQCGIREKAVLGDLTPPQL
ATFLQQLQALKSPRGGDQNLLPTINRSLSVPDSTPLWDLHTSASSPSGGEASLWDIPVNS
STQGPILEQLQLQLKFQERREVELRAKREEEERKRRQQQQQQQEEEGLFRRKQVRHQELL
LKLLQQQAPPTPPTPGSPPPLWAGLTKQGLSMKALLEHKPPPTREPTRTQAPNHRVQLGS
LSTAPLNQWVSETGPLWGAPDKSGGSSSGLTLWEDTVKSSGRSLGLKNSRSSPSLSDSYP
HLSGRPVRRKTEEEEKLLKLLQGIPRPQDGFTQWCEQMLHTLSATGSLDVPMAVAILKEV
ESPYDVHDYIRSCLGDTLEAKEFAKQFLERRAKQKASQQRQQQQEAWLSGPLQAAFPTNH
SAKLGPGPGPGPGEGSKAKRRALMLHSDPSILGYSLHGPSGEIESVDDY
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgagaccctcaactttgggcccgagtggctgcgggccctgtccggtggcagt
gtggcctccccgcctccgtcccccgccatgcccaagtataagttggccgactaccgctat
ggccgggaggagatgctcgccctctacatcaaggagcacaagattcctgaggaactacag
gacaaggagtttgctgcagtactgcaagaggaaccactgcagccactggcactggaaccg
ctgaccgaggaggagcaaaggaacttctccctgtcagtgaatagtgtggctgtgctgagg
ctgatggggaaaggggctgggacccccctgaccagcacatcccggggcagggtcagcgct
cggagtcgaggccgtggccgcggggatagctgcttttaccaaagaagcattgaagagggt
gaaggggccttcggcaggaacccccgggagatccagcgcagccagagttgggatgacaga
ggcgagaggagatttgagaaaccagcacggagggaaggagcacgctccagctttgaggag
agcgggactggcccacggaaggagcacgcgcgctcagacagcgagaattggcgttctctg
cgtgaggagcaggagggcggcgatgagggcagttggaggctgggggctgccccccggcgc
gatgctgatcgctggcgctcagccagccctgatggtggccctcgctctgcaggctggcgg
gagcatggagaacggcgtcgcaagtttgactttgacctgcgaggggatcgaggcgggtgt
ggggacgaggagggccgggccgggccaggcggggctccctcccggaggggccctggacct
gatggcttcgaggaggacaaggatgggctccctgagtggtgcctggatgatgaggatgag
gagatgggcacctttgatgcctcgggggccttcctgcccctcaagaagggccccaaggag
cccattcctgaggagcaggacctggacttccaggggctggaagaggaggaggaggaaccc
ccggaagcaccggagcaggaggggcctgaggcgggggtgaaggcaccgagcccgctgcca
tcacaagaagagcagcctggcccgacgtccccactacctgccttaggcccactctgggga
acccccggggaaggcgacaacactgtggagaaggaccggccagcagctgaagcggacgac
atgaggcaggtacagctcagtccagctgtgggttcaccctcaggtcctcctggggatctg
gaggacgatgaaggtctgaagcgcctgcagcaggaggccgagaagctggtggcctccttg
caggacagctgcctggaggaggagcgcttcaccgccgccatgcaggcccctggcctgcgc
cactcagcggttgccactgccctgcccctcagccatggcgcggcccggaagtggttctac
aaggacccacagggtgaaatccaaggccccttcaccacgcaggagatggccgaatggttc
caggctggctacttttccatggcactgctggtgaagcgtggctgtgatgagggcttccag
cccctgggcgaagtgatcaagatgtggggccgtgtgccctttgccccagggccctcgcca
cccccactgctgggaaatctggaccaggagcgactgaagaagcagcaggagctggcggct
gctgccttgtaccagcagctgcagcatcagcagttcctgcagctggtcaacagccgccag
ctcccgcagtgcgggatccgggagaaggcagtcctgggagacctgacgccaccacagttg
gccaccttcctgcagcagctccaagcgctgaaatcccccagaggtggggaccagaacctg
ctcccaaccataaaccgctccttgtcggtgccggattccacccccctctgggacttacat
acctcagcctcatcgccatcaggcggtgaggccagtctttgggacataccagttaactct
tcgactcagggtccgattctggaacagctccagctgcaactcaaattccaggagcgccgg
gaggtggaactcagggcgaagcgggaggaggaggagcgcaagcggcggcagcagcaacag
cagcagcaggaggaggagggtttgtttcggcgcaagcaggtgcggcaccaggagctgctg
ttgaagctgctgcagcaacaggcaccccccacaccccctacgccgggctccccaccacca
ctctgggctggcctcaccaagcagggcctgtccatgaaggcgctgctggagcacaagccg
cccccgacccgtgagcccacgcgtacccaggctcccaaccaccgcgtgcagctggggagc
ttgagcaccgcaccactgaaccaatgggtgtctgagacggggccgctgtggggtgcgccc
gacaagagtggtggcagcagcagtggcctaacactctgggaggacacggtcaagagcagt
ggccggagcctgggcctgaagaacagccgcagcagcccctccctcagtgactcgtaccca
cacctgtcgggccggcctgtgcgcaggaagacggaggaggaggagaagctgctgaagcta
ctccagggcattccccggccccaggacggcttcacgcagtggtgcgagcagatgctgcac
acgctgagcgccacgggcagcctggatgtgcccatggctgtggcgatcctaaaggaggta
gaatccccctatgacgtccacgactatatccgttcctgcctgggggacacgctggaagcc
aaagaatttgccaaacagttcctggagcggagggccaagcagaaagccagccagcagcgg
cagcagcagcaggaggcgtggctgagtgggcccctgcaggctgccttccctaccaaccac
agcgccaaacttggtcctggccctggcccgggccccggggagggcagcaaggccaagaga
agggcgctgatgctgcactcggaccccagcatcctggggtactccctgcatggaccttcc
ggtgagatcgagagcgtggatgactactga
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