Suncus etruscus (white-toothed pygmy shrew): 126031053
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Entry
126031053 CDS
T09902
Symbol
STXBP5
Name
(RefSeq) syntaxin-binding protein 5
KO
K08518
syntaxin-binding protein 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126031053 (STXBP5)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126031053 (STXBP5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
126031053 (STXBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
MIOS_WD40
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
126031053
NCBI-ProteinID:
XP_049645280
LinkDB
All DBs
Position
15:16618168..16809018
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AA seq
1124 aa
AA seq
DB search
MRKFNIRKVLDGLTAGSSSAAAASAAQQQQQAPHLAHPPGAREPDVPETLQAEHFQLCKT
VRHGFPYQPSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHESGSAVIQLQFLINEG
ALVTALADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNV
ESFTLSGYVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKAD
YRYTYDEAIHSVAWHHEGKQFICSHSDGTLTIWNVRAPTKPVQTITPHGKQLKDGKKPEP
CKPILKVEFKTTRSGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLC
ETPYPNDFQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVD
LIPALYSVGARQKRQGYSKKEWPINGGNWGLGAQSYPEIIITGHADGSLKFWDASAITLQ
VLYKLKTSKVFEKSRNKDDRPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYKFS
KQEVVTEVIPMLEVRLLYEINDVETPESEQAPPLPTPVGGSNPQPIPPQSHPSTSSSSSD
GLRDNVPCLKVKSLPLKQSPGYQTELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNCNG
IALVDYLQKAVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCK
SPTSAKMSRKLSLPTDLKPDLDVKDNSFSRSRSSSVTSIDKETREAISALHFCETYTRKA
DTSPSPCLWVGTTLGTVLVIALNLPPGGEQRLLQPVIVSPSGTILRLKGAILRMAFLDTT
GCLVPPAYEPWREPNVAEEKDEKEKLKKRRPVSVSPSSSQEMSENQYAVICSEKQAKVIS
LPTQNCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLLDVYYLPL
TNMRIARTFCFTNNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETPEAPNRGF
FKGLFGGGAQSLDREELFGESASGKASRSLAQHIPGPGGIEGVKGAASGVVGELARARLA
LDERGQKLSDLEERTAAMLSSADSFSKHAHEMMLKYKDKKWYQF
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaattcaacatccggaaggtgctggacgggctgacggccggctcgtcgtcggcg
gcggcggcctcggcggcgcagcagcagcagcaggcgccgcacctcgcgcacccgcccggc
gcccgcgagcccgacgtgcccgagacgctccaggccgagcacttccagctctgcaagact
gttcgccatggatttccctatcaaccctcagccttggccttcgatcctgtacagaagatc
ctggcagtaggaacacagactggtgctttaaggctctttggtcgcccgggagtagaatgt
tattgccaacatgagagtgggtctgctgtcatccagcttcagtttctgattaatgaggga
gctcttgtgactgccttggctgatgataccttacatttatggaatttacgtcaaaagaga
cctgccatactacattcacttaaattttgcagagaaagggttacattttgccatctgcct
ttccagagtaagtggctctatgtgggcactgaacgaggcaatatacatattgtcaatgtg
gagtccttcacgctctcaggctacgtcattatgtggaataaagccattgaactgtcatct
aaatctcacccaggtcctgttgtccatataagtgataatccaatggatgaaggaaagctt
ttgattggctttgaatctgggacagtagtgctgtgggacctcaaatcaaagaaagcagac
tacagatatacatatgatgaggctattcattctgttgcttggcatcatgaaggaaagcag
tttatttgtagtcattcagatggcactttgactatttggaatgtgagggcccctactaag
cctgtacagacaatcaccccacatggaaaacagttaaaggatgggaagaagccagaacca
tgcaaacctatcctcaaggtggaattcaaaacgactagatctggggaaccttttatcatt
ttatcaggaggtttgtcctatgatactgttggaagaagaccttgcttaacagttatgcat
gggaaaagtaccgctgtgctagagatggactattcaattgtcgactttttgacactttgt
gaaacaccataccctaatgattttcaagaaccgtatgctgttgttgttcttctagaaaag
gatttagtacttatagatcttgcacaaaatggatatcctatatttgaaaatccctatcct
ttgacaatacatgaatctcctgttacatgttgtgaatattttgctgattgtcctgtggac
ctcattcctgcactttattctgttggagctagacagaagcgtcaaggttatagcaaaaag
gaatggccaatcaatggaggtaattggggtttgggtgctcaaagttatccagagataatt
attacagggcatgctgatggatcacttaagttttgggatgcttctgcaataactttgcaa
gtattatataagctaaagacatctaaagtatttgagaaatcaagaaataaggatgacagg
ccaaacacagatattgttgacgaggacccgtacgccattcagatcatctcctggtgtccc
gaaagcaggatgctgtgtatcgcaggagtttcagctcatgtcattatttataagtttagc
aaacaggaagtagttacagaagtcattccgatgcttgaagttcgattgttgtatgaaatc
aatgacgtggaaaccccagaaagtgaacaggctccacctttaccaacaccagtaggtggc
tccaaccctcagcccatccctcctcagtctcatccatctaccagtagtagttcatctgat
ggacttcgtgacaatgtcccgtgtctaaaagttaaaagcttaccacttaaacagtctcca
ggttatcaaacagaactagttattcagttggtatgggtgagtggagaaccaccacaacaa
attaccagcctggcagtcaattcttcttatggattggtagtttttggcaactgtaatggc
attgcgttggtagactaccttcagaaagctgtcctcctcaacctgggcactattgaatta
tatggctccaatgatccttatcgtagagaacctcgatctcctcgtaaatctcggcagcct
tcaggagcaggtctctgtgatattagtgaaggaactgtagtcccagaggatcgctgcaaa
tctccaacttctgcaaagatgtcaaggaagttaagcttgcctactgacctaaagcctgat
ttagatgtaaaagataattcttttagtcgatcacgaagttcaagtgtaaccagcattgat
aaagaaacccgggaagctatctctgctcttcatttctgtgaaacttatactcgaaaggca
gatacatcaccttctccctgtttgtgggttggtacaacattgggtactgtgcttgtcatt
gcactgaacctccccccaggaggagagcaaaggcttcttcagccagtgattgtgtctcca
agtggtactatattaaggttaaaaggggcaatcctgagaatggccttcctggacaccacc
ggctgcttagtaccacctgcttatgaaccctggagagaacccaatgttgctgaagaaaaa
gatgaaaaggaaaaattgaagaaacgacggcctgtatctgtatccccctcttcttctcag
gaaatgagtgaaaaccagtatgcagtgatctgttccgaaaagcaggcaaaagtaatctca
ctgccaactcagaactgtgcttataagcagaacattacagaaacctcattcgtgcttcgt
ggagatattgtagctttgagtaacagtgtctgccttgcttgtttttgtgccaatggacat
attatgacttttagtttgccaagtttaaggcctctgttggatgtatattacttgcctctt
actaatatgcggatagccagaacgttctgcttcaccaacaatggacaggcgttatatctt
gtgtcacccacagaaatacagagactcacttacagtcaagagacctgtgaaaaccttcag
gaaatgttgggtgaactcttcactcctgtagaaacacccgaagcaccaaacaggggattc
tttaaaggcttatttggaggtggtgcacaatctcttgatagagaagaactatttggagaa
tcggcctcaggaaaggcatcaaggagtcttgcccaacacatccctggccccggtggcatt
gaaggtgtgaagggagccgcttctggagttgttggcgagctagctcgagcccggttggcc
cttgatgagcgaggccagaagctcagtgacctggaagagagaacggcggcaatgctatcc
agtgcagactcattttctaagcatgctcatgagatgatgttgaaatacaaagataagaag
tggtaccagttctga
DBGET
integrated database retrieval system
