Suncus etruscus (white-toothed pygmy shrew): 126031151
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Entry
126031151 CDS
T09902
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126031151 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126031151 (GTF2F1)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
126031151 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
126031151
NCBI-ProteinID:
XP_049645396
LinkDB
All DBs
Position
15:87369575..87377962
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AA seq
516 aa
AA seq
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MAALGPGSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNLATWNQARLERDLSNKKIYQEE
ELPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKAGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQGQDEEEEEKEKRGRKKPSELRIHDLEDDLEMSSEDSEASGEEGGRTSKATKKAPQ
SKGSKKKKKKKGSDDEALEDSDDGDFEGQEVDYMSDSSSSEDELPGKAKAQQQEEGPKGV
GEHSESSEESEEEKAPEEEREEEEDKKAPTPQDKKRKKDSSDESESSEESDIDSEASSAL
FMAKKKTPPKRERKPSGSSSRGNSRPGTPSTEPGSTPSTLRAAANKLEQGKRTSETPTAK
RLRLEAGAQNPSGKSTPQPQSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKK
TGLSSEQTVNVLAQILKRLNPERKMIGDKMHFSLKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgggccccggcagccagaatgtcaccgagtatgttgttcgagttcccaaa
aataccaccaaaaagtacaacattatggccttcaatgcagccgataaagtcaacctggcc
acttggaatcaggcccggctggagcgagacctgagcaacaagaagatttaccaggaggag
gagctgcccgagtcgggcgccggcagtgagttcaacaggaagctgcgggaggaggcgcgg
aggaagaagtatggcatcgtgctcaaggagtttcggcccgaggaccagccctggctgctc
cgagtcaacggcaaggcaggccggaagttcaagggcatcaagaagggcggcgtgacggag
aacacgtcctactacatcttcacccagtgccccgatggcgccttcgaggccttccccgtg
cacaactggtacaacttcacgccgctcgcccgccaccgcacgctcacggccgaggaggca
gaggaggagtgggagcggaggaacaaggtgctgaaccacttcagcatcatgcaacagcgg
cgcctcaaggaccagggccaggacgaggaggaggaggagaaggagaagcgtggccgcaag
aagcccagcgagctgcggatccatgacctagaggacgacctggagatgtcgtcagaggat
agcgaggccagcggggaagagggtggtcgaacctccaaggccacaaagaaggccccacag
tccaagggcagcaagaaaaagaagaagaagaaggggtcggacgacgaggccctggaggac
agcgacgatggggacttcgagggccaggaggtggattacatgtcggacagctccagctct
gaggacgagctgcccggaaaggctaaggcccagcagcaggaggagggccccaaaggcgtg
ggggagcacagtgagagcagtgaggagagcgaggaggagaaggcgcctgaggaggaacgg
gaggaggaggaggacaagaaggcgccgacgccacaggacaagaagcgcaagaaagacagc
agcgatgagtctgaaagttctgaggagagtgacattgacagcgaggcctcctcagccctc
ttcatggcgaagaagaagacgccccccaagagagagcggaagccatcaggcagcagctcc
cgagggaatagccggccggggacgcccagcaccgagccaggcagcacgccgtccaccctt
agggcagccgccaacaagctggagcaaggcaaaaggaccagcgagacaccaacggccaag
cggctgaggctggaagccggagcccagaacccatcgggcaagtccaccccgcagcctcag
tcggggaaatcaacacccagcagcggggatgtgcaggtgacagaggacgccgtgcgccgc
taccttacccggaagcccatgaccaccaaggacctgctgaagaaattccagaccaagaag
acggggctgagcagcgagcagacagtcaacgtcctggcgcagatcctcaagcgcctcaac
cccgagcgcaagatgatcggggacaagatgcacttttccctcaaggagtga
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