Suncus etruscus (white-toothed pygmy shrew): 126031300
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Entry
126031300 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126031300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126031300
03036 Chromosome and associated proteins [BR:
setr03036
]
126031300
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126031300
Coactivators
SAGA/TFTC/STAGA complex
126031300
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126031300
STAGA complex
126031300
TFTC complex
126031300
SAGA complex
126031300
SLIK complex
126031300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
CBFD_NFYB_HMF
TFIID-31kDa
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
126031300
NCBI-ProteinID:
XP_049645549
LinkDB
All DBs
Position
15:24982173..25156442
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AA seq
657 aa
AA seq
DB search
MTYERKTSIIDQLSNTVLPSESMKVVAESMGINQIPENACQLLTEEVSYHIKEIAQEALK
FMQMGKRRKLTTGDMDYAFKLKNVEPLYGFQDQEFIPFHSASGGGQELYFYEDKEVDLSD
IINTPLHRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKVKAMQPLNSAKPGQEDDG
FLKGKGVALAASKGKKQKVPAFLDGTPFRLKPRSIHELSVEQQLYYRAITEACLGSSEAK
RVQALQSIATDPGLSQMLPWFSTFISEGVRVNMVQNNLALLIYLMCMVKALMDNPTLYLE
KYAHELLPAVLTCTVSKQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQARITKI
FAESCMDEKTPWTMRYGSIAGLAELGHDVIKSLILPWLQQEGERIQAVLDCPALSHMDRI
GAEHVQNLLLKHCAPVLAKMRLPPDNQDTYHTEFGSLGAVLCSHVVKARAQAMLQAQQVH
KATLTITQPQPTLTPSQAPQSVPHTPGLLKEPGSVLMPMQTLVSSRSPAPPQPSPPPTKF
LIKSSSSSTSSTQQVLSLSTSVPGSSSTTMSRITTTVPSMQPRVKLVSITFKAPTTTLAS
GPDSVQKYIVVSFPQLAKAKNVVEHDQCTLMEEDDKKEEVGRERARKRHEISIKLLD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacttatgaaagaaaaacatcaatcattgaccagctcagtaacacggtgctgccatct
gagtccatgaaggtggtggcggagtccatgggcatcaaccagatcccagagaatgcatgc
cagctgctgacagaggaggtcagctaccacatcaaagagatcgcccaggaggccctgaag
ttcatgcagatggggaagcggaggaagttgaccactggcgacatggactatgccttcaag
ttgaagaatgtggagcccctgtatggattccaggaccaggagttcattcccttccactcc
gcctctggtgggggccaggagctctacttctatgaggacaaggaggtggatctgagtgac
attatcaacacccctctgcacagagtgcccctggacgtctgcctcaaggcgcactggttg
agcattgaaggctgtcagcccgccattcccgagaacccacctccagctcctaaggagcag
cagaaggttaaggccatgcaacctttgaactcagccaagccgggccaggaggatgatggc
ttcctgaaaggaaaaggggttgccctggcagctagcaaggggaagaagcagaaggtgccg
gccttcctggatggcaccccctttcggctcaagccccgcagtatccatgaactatcagtg
gagcagcaactctactacagggcaatcactgaggcctgtttaggctcctctgaagccaag
agagtgcaagctctccagagcatcgccacagaccctgggctatcccagatgctgccctgg
ttcagcaccttcatctcggagggggtccgtgtgaacatggtgcagaacaacctagccctg
ctcatctacctgatgtgcatggtcaaggcgctcatggacaacccaacactgtacctggag
aaatatgcgcacgagctactcccagctgtgttgacatgcaccgttagcaaacagctgtgt
ctgcggccagatgtggacaaccactgggcactgcgtgattttgctgcccgcctggtggcc
cagatctgcaagcacttcagcacaaccaccaacaatatccaggcccgcatcaccaagatc
ttcgccgagagttgcatggatgagaagaccccatggaccatgcgctatggctccattgca
ggcttggctgagctgggacatgatgtcatcaagtccctgatcctgccatggctacagcag
gagggtgagcggatccaagccgtgcttgattgcccagcgctcagccacatggaccgcata
ggtgccgaacacgtgcagaacctgctgctgaaacattgtgccccggtcctagccaagatg
cgactgccacctgacaatcaggacacctaccacaccgagttcggatccctgggagctgtc
ctctgctcacatgtggtgaaagcacgggcccaggccatgctgcaggcccagcaagtccac
aaggccacactgaccatcacgcagccgcagcccacactcaccccctcacaggccccacag
tctgttcctcacactcctggtttgctcaaggagcctggttctgtcctgatgcctatgcag
accctggtgtcttcacgatcccctgccccaccacagccatcccctcctcccaccaagttc
ctgataaagtcgtcatcctccagcacctcatccacccagcaggtcctgtccctcagcacc
tcggtgcctggctcgagctccaccaccatgtcccgaatcaccaccacagtccccagcatg
cagcccagggtcaagctggtctccattactttcaaagcgcccacaaccaccttagcctct
gggcctgacagtgtccagaagtacatcgtggtctcattcccccaactggcgaaagcaaag
aatgttgtagaacatgatcagtgcaccttgatggaagaggatgacaagaaagaggaggtg
gggcgggagcgggctcgaaaaaggcatgaaataagtatcaagctcctggactag
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integrated database retrieval system
