Suncus etruscus (white-toothed pygmy shrew): 126031339
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Entry
126031339 CDS
T09902
Symbol
PAPOLB
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126031339 (PAPOLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126031339 (PAPOLB)
Enzymes [BR:
setr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
126031339 (PAPOLB)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
126031339 (PAPOLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
126031339
NCBI-ProteinID:
XP_049645555
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All DBs
Position
15:77932285..77935052
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AA seq
817 aa
AA seq
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MSLDGPDDSPRQSPQRPHPIISRLNAWEQGLKMLRSGWEIYQDKRKSAPSVRMPHLARAS
VLAPKPRLASPRLASSSAGPDRKCLKRRGAVLERVGAGHVRTPAPPASVDHGLGQRPAGE
WRRRRGPGPLARRCLAASNDCRFRPKHYGISCPISVAAPRDNDCILTQKLIETLTPFGVF
EEEEELQRRTLILEKLNALVKEWIREISESKSLPQAVLENVGGKIFTFGRYRLGVHTKGP
DIDALCVAPRHVDRERLFTSFXXEAELHHEVRDLRAVEEAFVPVIKLCFDGIEIDILFAR
LALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAK
CHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEE
RNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMIMIEEFKQGLAITHEIL
LCKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFIT
LAHVNPQSFPAPKEESPDKEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQAFTDTVYRQA
INSKMFEMDMKIAALHLRRKELHQLLPNHVLPRKKTLTGGVHLTALADSDLDLPVTGEDS
SAIALPACALKMGPGSDSPQGRNSPAPAVAVAPVNQGQATEVALQQPTSPSESSGAATGE
NLPPLAAYPATKSTVPIVVSSACLVNHPPMSVGSAATSIGNPIVGVEELSPAHKATIQPP
PPTLWASQETPSTADLSSVPAFPANPIPVIKNLIKAD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggatgggcctgatgactcccctaggcagagtcctcagagaccacaccctatt
atctccagattgaatgcctgggagcagggcctgaagatgctcaggagtggctgggagatc
tatcaggacaagaggaaaagcgcgccgtccgtccgcatgccgcacctcgctcgtgcgtca
gtgctcgcgcccaagcctcgcctcgcctcgcctcgcctcgcctcctcctccgcagggccg
gaccgaaagtgcttgaagcggcggggagcagtgctggagcgggtcggagccgggcacgtg
aggacacccgcgcctcccgcctccgtggatcatggactcgggcagcggccggctggagag
tggcggcggcggcgggggccggggcctttggcccggcggtgcctggctgctagtaacgat
tgccgtttccggcccaagcactacggcatctcctgccccatcagcgtggcggccccccgc
gacaacgactgcatcctcacccagaagctgattgaaaccctgacgcctttcggggtgttc
gaggaggaagaggagctgcagcgccggactctgattttggagaagctgaatgccctggtc
aaggaatggatccgagagatcagcgagagcaagagcctgccgcaggcggttttggaaaac
gtgggtgggaagatcttcaccttcggtcgctaccggttaggggtccacaccaaggggccg
gacatcgatgctctgtgcgtggcaccccgccacgtggaccgggagcgacttttcacctcc
ttctaatgagaagctgagctgcaccacgaagtgagggacctccgggccgtggaggaggcc
tttgtgccggtgatcaaactctgcttcgatggcatcgagatcgacatcctgttcgccagg
ctggccctgcagacaatcccagaagacctggacctgagagacgacagcctgctgaagaac
ctagacatcaggtgcatcagaagcctgaacggctgccgtgtgaccgacgagatcctgcac
ctcgttcccaacattgaaaactttcggcttactctgcgcgccatcaaactgtgggccaag
tgccacaatatctactccaacatcttgggcttcttgggaggcgtttcctgggccatgctg
gtggcaagaacctgccagctctaccctaatgccgtggcctccacgctggttcgcaaattt
ttcctggtgttctccgagtgggagtggccaaacccggtgctgctgaaagagcctgaagaa
cgcaacctcaacctgccggtgtgggacccccgggtaaaccccagtgacaggtaccatctc
atgcccatcatcacgccagcctacccccagcagaactccacgtacaacgtgtctgtctcc
acgcggatgatcatgattgaggagtttaagcaaggacttgccatcacccacgagatcttg
ctgtgtaaggccgagtggtccaagctctttgaagctccaagcttcttccagaagtacaag
cactatattgtccttctagccagtgccccaaccgagaagcagcatttagagtgggtgggc
ttagtggagtccaaaatccgaatcctggtgggcagcttggagaagaacgagttcatcacg
ctggcgcacgtgaacccacagtcgttcccagctcccaaagaagaaagtcccgacaaggaa
gagttccgtaccatgtgggtgatagggctagtgttaaagaagcccgaaaactcagaagtc
ctcagtattgacctcacctatgatatccaggcgtttacagatacagtttataggcaggcg
ataaacagtaagatgtttgagatggacatgaaaatcgccgcgttgcatttgagaagaaag
gaactgcaccagcttctgcccaatcatgtgcttccacggaagaaaactctcacgggtggc
gttcacttgacggccctggctgacagtgacctcgaccttcctgtcactggtgaagacagc
tcggcaatagccctccctgcctgtgccttgaagatggggcctgggtctgacagcccgcag
ggcaggaacagccctgcccctgctgtcgcggtagcccctgtgaaccagggccaagctact
gaagttgccttgcaacaaccaactagtcctagcgaaagctcgggggctgctactggtgag
aacctacctccactggctgcttacccagcgaccaaatccacggtccccatagttgtttct
tctgcatgcttggtgaaccatccacccatgtccgtgggaagcgcagccacaagcataggg
aacccgatagtaggtgtagaggagctcagtccagctcacaaagcaactattcagcccccg
ccccccactctttgggcctcgcaggagacaccctcaactgcagacctttcgagtgtccct
gctttccctgcaaatcctattcctgttatcaagaatttaataaaagcagattga
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