Suncus etruscus (white-toothed pygmy shrew): 126031352
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Entry
126031352 CDS
T09902
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03020
RNA polymerase
setr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126031352 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
126031352 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126031352 (POLR3A)
Enzymes [BR:
setr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126031352 (POLR3A)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
126031352 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126031352
NCBI-ProteinID:
XP_049645564
LinkDB
All DBs
Position
15:47826041..47859484
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYGQDNNHAPLVYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGVLQMICKTCCRILLSAE
EKQQFLEYLRRPGLTYLQKRGLKKKISDKCRKKTICHHCSAFNGTVKKCGLLKIIHEKYK
TNKKVVDPMVSSFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFRRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIVEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNRANIHFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDVVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASVLVGKDEKIKVRLPPPAILKPVTLWTGKQI
FSIILRPSEDSPVRANLRTKGKQYCGKGEDLCTNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKNELLNAG
YEKCDGYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFEHRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFRRVLDNIRAVFPCRNEPALSKNELTLTTESIMSKSEFLC
CQDSFLQEIKSFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDVAVHGEAVVCITPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGIKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPNPPRRPLIFD
TNEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttcgggagacagacgtggccaagaagataagccacatctgcttc
gggatgaagtcacccgaggagatgcgacaacaggcccacatccaggtggtgagcaagaac
ctgtacgggcaggacaacaaccatgctccactggtctacggggtgctggaccacaggatg
ggcaccagcgagaaggaccggccttgtgaaacatgtgggaagaacctggcagactgtctg
ggtcactacggctacatcgacctagagctgccatgtttccatgtgggctacttccgagct
gtcatcggtgtcctgcagatgatctgcaaaacctgctgtcgtatcctgctgtcagccgag
gaaaagcaacagttcctggagtacctaaggcggcccggcctcacttatctgcagaagcgt
ggcctaaagaaaaaaatctctgacaagtgccgaaagaaaaccatctgccaccactgcagt
gccttcaatggtaccgtgaagaaatgtgggttattgaaaatcatccatgagaagtacaag
accaacaagaaagtggtggaccccatggtttccagtttccttcagtcattcgagacagcc
attgagcataacaaggaagttgagcccctgcttggaagggcacaggaaaacctgaacccc
ttagtggtcctgaacctgtttcgacgaatcccagctgaagacatcccgctgttactcatg
aaccctgaagctgggaagccctcggacttgatcctcacccgcctcttggttccaccactg
tgcatccgtccatccgtggtcagtgacctcaaatcaggcaccaacgaggatgacctgacc
atgaagttgacagagatcatctttctcaatgacgtcattaagaagcaccggatctcaggg
gccaagacacagatgattgtggaggactgggacttcctacagttgcagtgcgctctctat
atcaacagtgagctctcagggatccccctcaacatggcacccaagaagtggacacgtggt
tttgttcagcgcctcaaggggaagcagggtcgcttccgaggtaatctgtccgggaagcgg
gtggacttctcaggtaggactgttatctcccctgaccccaatctccggatcgatgaggtg
gcggtgccagtgcatgtggccaaaatcctgacctttcccgagaaggtgaacagggctaac
atccacttcctgaggaagttggtgcgcaacggacctgaagtccaccctggagccaatttc
atccagcagagacacacacagatgaagaggttcctcaagtacggaaaccgggagaagatg
gcgcaggaactgaagttcggcgatgttgtagagcggcatctcatcgatggggacgtggtg
ctgttcaatcggcagccgtcgctgcacaagctcagcatcatggcgcatctggctcgggtc
aagcctcaccgaaccttccgctttaatgaatgtgtttgcaccccatacaacgctgacttc
gacggggacgaaatgaatctgcatcttccccagacagaagaagcgaaggcagaggcactt
gtcctaatgggaacgaaagcgaatctcgtgaccccaaggaatggagagcccctaatcgct
gctatccaggacttcctaacaggagcttatctcctcactctcaaggacactttcttcgac
cgagccaaagcctgtcagattattgcttcagtactggttggcaaggatgagaaaattaaa
gtccgtctcccaccaccggcgatattgaagccagtgaccctttggacaggaaagcagatc
ttcagcatcatcctcagacccagtgaagacagcccagtgcgcgccaaccttcggaccaag
gggaagcagtactgtgggaaaggcgaggacctatgcaccaatgactcctatgtcaccatc
cagaacagtgagctgatgagtggcagtatggacaagggcacactgggctcgggctccaag
aacaacatcttctacatcttgctgcgcgactggggccagaacgaagcggccgatgccatg
tctcggctggcccggctggcgcctgtctacctctcgaaccgcggcttctccattgggatt
ggcgatgtcacccctggccagggactgctgaaggccaagaacgagctgctgaacgccggc
tacgagaagtgcgatggctacattgaggccctcaatactggcaaactgcagcagcaacct
ggctgcacagctgaggagacattggaggccctgatcctgaaggagctctctgtgatccgt
gatcacgcgggcagcgcctgcctccgtgagctggacaagagcaacagtcccctcaccatg
gctttgtgtggctccaaaggctccttcatcaacatctcgcagatgattgcatgcgtgggc
cagcaggccatcagcggctcccgtgtacctgacggctttgagcaccgctccttgccccac
tttgagaagcactcaaagctcccagctgccaaaggatttgtggccaatagcttttactct
ggcctgaccccaaccgagttcttcttccacacaatggctggccgagaagggctggtggac
acggctgtgaagacggccgaaactgggtacatgcagcgaaggctcgtcaagtctctggaa
gacctttgctcgcagtatgatctgaccgtccgcagctccacgggggacattatccagttc
atttacgggggtgatggcctagacccagctgccatggaaggcaaagacgagccactggag
ttccgcagggttctggacaacatcagagcagtgtttccatgcaggaatgagcctgcactc
agcaagaacgagctgacactgaccactgagtccatcatgagcaagagcgagttcctgtgc
tgccaggacagctttctgcaggagatcaagagcttcattaagggggtttctgagaagatc
aagaagaccagagacaagtatggcatcaatgataatggcaccacggagccccgcgtcctc
taccagctggaccgaatcacccctacccaaatagagaagtttctggagacttgtagagac
aagtacatgagggcccagatggagcctggctcagctgtgggggccctgtgtgcacagagc
attggtgagccaggcacccagatgaccctgaagaccttccacttcgctggcgtggcctcc
atgaacatcactctgggggtcccccggatcaaggagatcatcaacgcatctaaggccatc
agcacacccatcatcacagcccagttggataaggacgacgatgccgactatgctcgcctg
gtgaagggcaggatcgagaaaaccctcctcggcgagatctccgagtacattgaggaggtc
tttctccctgacgactgtttcatccttgtcaagctgtccctggagcggatcaggctgcta
agattggaggtgaatgcagagacagtgcgttattccatatgcatgtccaaactgcgtgtg
aagccgggtgacgtagccgtgcacggggaggctgtggtgtgcatcaccccccgggagaac
agcaagagctccatgtactacgtgctgcagttcctgaaggaagatctccccaaggtggtg
gtgcagggcatccctgaggtgtcccgggctgtcatccacatcgacgaacagagtgggaag
gagaagtacaagctcctggtggaaggggacaacctacgtgccgttatggctacccatggc
atcaaaggcacacggaccacgtctaacaacacttatgaggtggagaaaactctgggcatt
gaggctgcccgcaccaccatcatcaacgagatccagtacacgatggttaaccacggcatg
agcattgaccgccgccatgtcatgctgctctcagacctcatgacctacaagggtgaagtt
ctgggcatcacgcgttttgggttggccaagatgaaggagagcgtgctcatgctggcgtcc
ttcgagaagacggctgaccatctctttgacgccgcctacttcggccagaaggactccgtg
tgtggagtctctgagtgcattatcatgggaatccccatgaacattgggactggactcttc
aagctgctccacaaagccaacagggaccccaatcctccccggagacccctgatcttcgac
accaacgagttccacatccccctggtcacgtag
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