Suncus etruscus (white-toothed pygmy shrew): 126032047
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Entry
126032047 CDS
T09902
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126032047 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126032047 (HERC3)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126032047 (HERC3)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
HECT type E3
126032047 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
126032047
NCBI-ProteinID:
XP_049645709
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All DBs
Position
16:77951548..78036340
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AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGIGSNLQGIVTEPQVCGFISDRSVKEVACGGNHSVFLLEDGGVYTCGL
NTKGQLGHEREGNKPEQIGALADEHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLVT
VEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDDEDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGAKGQLGTGRTCNVQCPSPVKGHWAAHSRQLSASTDRFK
YHIVKQIFSGGDQTFVLCSKYENSSPAVDFRTVNQAHYTSLINDETIAVWRQKLSEHNNS
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNP
SKVLDNWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKARPSIIQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVQPCLEDLKELSPTEGRSLQE
LLDYPGEDIEDTFCLNFTICRESYGVVEQIKLIPGGDQVIVCKDNRQEFVDAYVNYVFQI
SVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEATAIYKGDYSAIHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYLPVAHTCYN
LLDLPKYSSKETMRARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctctgggccaacctgggattggcagcaaccttcaaggg
attgtgacagagcctcaggtgtgtggcttcatctcggacagaagtgtcaaggaggtggcc
tgtgggggaaaccattctgtgttcctgcttgaggacgggggtgtctacacctgtggcttg
aacaccaagggacagcttggccatgagagggaaggaaacaagccagagcaaattggagct
ttggcagatgagcacattgtccatgtggcatgtggtgagtctcacagtcttgccctcagt
gaccagggacagctcttttcttggggtgcagggagtgatggtcaacttggactcgtgact
gtggaggattcagtggcagtgcccaggttaatacaaaagctgaaccaacagacaatattg
caagtttcctgtggcaactggcattgtttagctcttgcagctgatggtcaattcttcaca
tggggaaagaatagccatgggcaacttggcctggggaaggagttcccatctcaggccagc
ccacagagggtgagatctctggaggggatcccattggcacaagtggctgcaggaggagct
cacagcttcgccctctctctgtcaggagctgtttttggctggggcatgaataatgcaggc
cagctagggctcagtgatgatgaagatcgagagtctccttgccatgtgaaactcttacga
acacaaaaagttgtttatattagttgtggagaagaacacacagcagtcctcacgaaaagc
ggaggtgtgtttacctttggagctggttcctgtgggcaacttgggcatgattccatgaat
gatgaggttaatccaagaagagttctagagctcatgggcagtgaagtgactcagattgcg
tgtggcagacagcacactctagcctttgtgccttcttctggactcatctacgcatttggt
tgtggagccaaaggtcagctgggaactggacgcacgtgtaatgtgcagtgtccatctccg
gtgaaggggcactgggccgcccacagtaggcagctctcagccagcacagatcgctttaaa
tatcatattgttaagcagatcttctctggaggagaccaaacttttgtactttgctccaaa
tatgagaattcttctcctgctgttgacttcagaactgtgaaccaggcacattataccagt
ttaataaatgatgaaaccatagcagtttggagacagaaactctcagaacacaacaactcc
aatacaatcaatggtgtagttcagatattatcttctgcagcctgttggaatggaagcttt
ctggaaaaaaaaatcgatgagcattttaaaaccagtcccaaaatccctgggattgacctg
aactcaactagagtattatttgagaagttgatgaactctcagcactccatgattctagaa
cagattttgaacagctttgaaagttgcctgattcctcaattgtcaagttctccaccagat
gttgaagcaatgagaatctatttaattctacctgagtttcctttgctccaggactccaaa
tattacatcacactgactattcccctggccatggccattctacgtctggatacaaacccc
agcaaagtcttagataactggtggtctcaggtatgcccgaaatatttcacgaagctggta
aacctctataaaggtgcagtcgtttatcttctgaggggaagaaaaacattcttaattcct
gtactatttaacaattatattacagcagctttgaagctcttggaaaaattatataaggta
aatcttaaagtaaagcatgtggaatatgatacattttatattcctgagatttctagtctt
gtggacattcaagaagactacctcatgtggttcctgcatcaagctggcatgaaggccagg
ccatctataatacaggatgcagtaacactttgttcgtaccctttcatctttgacgcacaa
gccaaaacaaaaatgctacagactgatgctgaactacagatgcaggtagcggtcaacggg
gccaacctgcagaatgtcttcatgcttctcacactggagcctctgctggccagaagcccg
ttcctggttcttcatgttcgcagaaacaacctcgtgggagatgccctacgagagctgagc
atccattctgatattgatttgaaaaagcctctcaaagtcatctttgatggtgaagaagca
gtggatgccggtggtgtcacaaaggagttctttcttttgctgttaaaagaactcttgaat
cccatctatggaatgtttacctactatcaggattcaaatctcttgtggttttcagatacg
tgttttgtagagcacaattggtttcacttgattggcataacttgtggactggctatctac
aactctacagtggttgaccttcacttccccttggcactctacaagaagttactgaatgtc
cagccttgcttagaagacttaaaggaactgtcacccactgaaggaaggagtcttcaagaa
cttttagattaccctggagaggatattgaggatactttctgcctcaacttcacaatctgc
cgagaaagctatggagtggtggagcagataaagctgattcctggaggagaccaagtcatt
gtatgcaaagataacaggcaggaatttgtagatgcatatgtgaattatgtcttccaaatc
tcagttcatgaatggtacacggctttctccagcggcttcctcaaggtgtgtggtggcaaa
gtgcttgagctcttccagccttcggaactaagggccatgatggttggaaacagcaactac
aactgggaagaattggaagcgacggctatctacaagggtgattactcagccatacatcca
actgtgaaactattttgggaaacttttcatgagtttccactggaaaaaaagaagaagttt
ctcttgttcctgactggcagtgaccgcatccccatttatggcatggcgagcctgcagatt
gtcatacagtccacagccagtggagaggagtacttgcctgtggcccacacttgctacaac
cttcttgacctccccaagtacagcagcaaagaaaccatgagagcacgactaacccaggcg
cttgacaactacgagggcttcagtttggcttga
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integrated database retrieval system
