Suncus etruscus (white-toothed pygmy shrew): 126032085
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Entry
126032085 CDS
T09902
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126032085 (WDR1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
126032085 (WDR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
eIF2A
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_SPT8
NBCH_WD40
Ge1_WD40
Beta-prop_NUP159_NUP214
WD40_like
WD40_RFWD3
RMC1_N
Beta-prop_ELP1_1st
KNTC1_N
PQQ
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
BBS2_Mid
DUF7165
Motif
Other DBs
NCBI-GeneID:
126032085
NCBI-ProteinID:
XP_049645747
LinkDB
All DBs
Position
16:complement(6704436..6722916)
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AA seq
638 aa
AA seq
DB search
MPYEIKKVFASLPQVERGVSKILGGDPKGNNFLYTNGKCVILRNIDNPSVADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVV
GEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFK
FKFTIGDHSRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVGALGGSKAHDGGIYAV
SWSPDSNQLLSASGDKTAKLWDVETAAAVTTFTLGSNVLDQQLGCLWQKDHLLSLSLSGY
INYLDKNNPSKPLQVIKGHSKSIQCLTVHSNGGKSYIYSGSHDGHINYWDAETGENDAFT
GKGHTNQVSRMAVDESGQLVSCSMDDTVRYTNLELRDYSGQGVVKLDVQPKCVAVGPGGY
TVVVCIGQIVLLKDQKKCFSVDNLDYEPEVVAVHPGGDTVAVGGADGNVRLYSILGSTLK
AEDKLLEAKGPVTDLAYSHDGAFLAVCDASKVVTVFSVADGYTENNVFYGHHAKIVCLAW
SPDNEQQLSSCGSQPAFVRNIPEAAPPEHTVPCPPWLLPLSREVPPYCPPSLLVRSFQPQ
WQEGEPLVAAGTRVWGSGLRSHQPCFMISVCVIFRADS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgagatcaagaaagtgttcgccagcctcccccaggtggagaggggtgtctcc
aagatcctcggcggcgaccccaagggcaacaattttctctacaccaatggaaagtgcgtc
atcctgaggaacatcgacaacccgtccgtggccgacatctacacggagcacgcccaccag
gtggtagtggccaagtacgcacccagcggcttctacatcgcctctggagatgtctcgggg
aagctgcggatctgggataccacgcagaaggaacacctcctgaagtacgagtaccagccc
tttgccggcaagatcaaggacattgcgtggacggaagacagcaagaggattgctgtggtc
ggagaaggccgggagaagtttggcgctgtgtttctgtgggacagcggctcgtctgtgggt
gagatcacgggccacaacaaggtcatcaacagcgtagacatcaagcagagccggccctac
cgcctagccactggcagcgacgacaactgtgctgccttcttcgaggggcccccgttcaag
ttcaagttcaccattggcgaccacagccgctttgtcaactgtgtgcggttctcacccgac
gggaacagatttgccacagccagtgctgacggccagatcttcatctatgatgggaagaca
ggggagaaggtgggtgcgctgggtggcagcaaggcccacgacggcggcatttatgcggtg
agttggagccccgatagcaaccagctgctctcagcctctggggacaagacggccaagctg
tgggacgtggagactgcagcagccgtgaccaccttcaccctgggctccaatgtcctggac
cagcagctgggctgcctgtggcagaaggaccatctgctcagcctgtccctgtccggctat
atcaactacctggacaagaacaaccctagcaagcccctacaggtcatcaagggtcacagc
aagtccatccagtgtctgaccgtgcacagcaacggaggcaagtcctacatctactcgggg
agccacgacggccacatcaattactgggatgccgagactggtgagaacgatgccttcact
gggaaggggcacacgaatcaggtgtcccggatggcagtggacgagtcggggcagctggtc
agctgcagcatggacgatacggttcgctacaccaacctggagcttcgggactacagcgga
cagggggtcgtgaagctggatgtgcagcccaagtgtgttgctgtggggcccggaggctac
actgtggtcgtgtgcatcggccagatcgttctgctcaaggaccagaagaagtgcttcagt
gttgacaaccttgactacgagcctgaagtggtggccgtgcaccccggtggcgacacggtg
gcagtcgggggcgcagatgggaacgtccggctctactccatcctgggctccacgctcaag
gcggaggacaagctcctagaagccaagggccccgtcaccgacctcgcctactcccacgac
ggagccttcctcgctgtgtgtgatgccagcaaagtggtcacggtgttcagtgtggccgac
ggctacacggagaacaacgtcttctacgggcaccatgccaagatcgtctgcctggcctgg
tccccggacaacgagcagcagctcagctcgtgtgggagccagcccgcgttcgtgcggaac
attccagaggcagcgcctccagagcacaccgtcccgtgccccccgtggctcctgcctctg
tcaagggaggttccaccttactgccccccaagcctcctcgtgagaagcttccagccccag
tggcaggaaggggagcccttggtggcagccggcacacgggtgtggggcagtgggttgcgc
tcacaccagccttgtttcatgatcagtgtctgcgtgattttcagggcggattcgtga
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