Suncus etruscus (white-toothed pygmy shrew): 126032088
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Entry
126032088 CDS
T09902
Name
(RefSeq) elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr05134
Legionellosis
setr05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126032088
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
126032088
09174 Infectious disease: parasitic
05140 Leishmaniasis
126032088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126032088
03016 Transfer RNA biogenesis [BR:
setr03016
]
126032088
03012 Translation factors [BR:
setr03012
]
126032088
04131 Membrane trafficking [BR:
setr04131
]
126032088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126032088
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
126032088
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126032088
Translation factors [BR:
setr03012
]
Eukaryotic type
Elongation factors
126032088
Membrane trafficking [BR:
setr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
126032088
Exosome [BR:
setr04147
]
Exosomal proteins
Proteins found in most exosomes
126032088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
126032088
NCBI-ProteinID:
XP_049645753
LinkDB
All DBs
Position
16:complement(4391028..4392794)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
ISYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGSASGTTLLEALDCILPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacatcaacatcgtcgtcatcggccacgtcgactcgggcaag
tccaccaccaccggccatctgatctacaaatgtggcggcattgacaagaggaccatcgag
aaattcgagaaggaggccgccgagatgggaaagggctccttcaagtatgcctgggtcttg
gataagctgaaagctgagcgtgaacgtggtatcaccattgatatctccctgtggaagttt
gagactagcaagtattacgtgaccatcattgatgccccaggacacagagacttcatcaag
aacatgattacaggcacctctcaggctgactgtgctgtcctgattgttgctgctggagtt
ggtgaattcgaggctggtatctccaaaaatgggcagacccgcgagcatgcccttctggct
tacacactaggtgtgaagcagcttattgttggtgttaacaaaatggattccactgagcca
ccctacagccagaagagatacgaggaaattgttaaggaagttagcacctacattaagaaa
atcagctacaacccagataccgtagcatttgtgccaatttctggttggaacggtgacaat
atgctggagccaagtgctaacatgccatggttcaaaggatggaaagtcacccgtaaagat
ggcagtgccagtggaaccacacttcttgaagccctggattgcatcctgccacccactcgc
ccaactgacaaacccctgcgcctgcccctccaggatgtgtacaagattggaggtattggt
actgtccctgtgggccgagttgagactggtgttctcaaacctggcatggtggtcacattt
gctccagtcaacgttacaactgaagttaagtctgttgaaatgcaccatgaagctcttagt
gaagcacttcctggggacaacgtgggtttcaatgtcaagaacgtatctgttaaggatgtt
cgtcgtggcaatgtggctggtgacagcaaaaatgaccctccaatggaagcagcaggcttc
actgctcaggtgattatcctgaaccatccaggtcaaatcagtgctggctatgcacctgtg
ctggattgtcacacagcccacattgcttgcaagtttgctgagctgaaggagaagattgat
cgtcgttctgggaaaaagctggaagatggccctaaattcctgaagtctggtgatgctgcc
attgttgatatggtgcctggcaagcccatgtgtgtggagagcttctctgactaccctccc
ctgggtcgttttgctgttcgtgacatgagacagactgttgctgtgggtgtcatcaaagca
gtggacaagaaggcagctggagctggcaaggttacaaagtcagcccagaaggctcagaag
gctaaatga
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