Suncus etruscus (white-toothed pygmy shrew): 126032340
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Entry
126032340 CDS
T09902
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126032340 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126032340 (DHX15)
03009 Ribosome biogenesis [BR:
setr03009
]
126032340 (DHX15)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126032340 (DHX15)
Spliceosome [BR:
setr03041
]
Complex A
U2 snRNP components
U2 related factors
126032340 (DHX15)
Complex B
126032340 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126032340 (DHX15)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
Helicases
126032340 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
AAA_29
nSTAND3
Cas3-like_C_2
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
126032340
NCBI-ProteinID:
XP_049645952
LinkDB
All DBs
Position
16:complement(20316691..20377211)
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AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGAEGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSAHSAHSAHSAHSAHPGHAGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggcaccggctggacctgggggaggactacccgtcgggcaagaagcgcgcg
ggggccgaggggaaggatcgagatcgtgaccgggatcgtgaagatcgatctaaagatcga
gaccgagagcgggatagaggagatagagagcgggaaagggagaaagaaaaagagaaggaa
ttgagagcctctactaatgctatgcttatcagtgctggattaccacctttaaaggcttcc
cattcagctcattctgcccactcagcgcattcagcacattcggcacattctgctcatcct
ggacatgccggacatgctggacacacatcacttccacagtgcattaatccattcaccaac
ttgccccatacgcctcgatattacgatattctaaagaaaaggcttcaacttccggtttgg
gaatacaaggataggtttacagatatcctggttagacatcagtcgtttgtactggttggt
gagactgggtccggtaaaacaacacagattccccagtggtgtgtggagtacatgcgatca
ttaccaggacccaagagaggagttgcctgtacccaacccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgttatgttgggccaggaagttggttactcc
attcgatttgaagactgcagcagtgcgaaaaccattctaaaatatatgactgatgggatg
ttacttcgtgaagctatgaatgatccactcctggagcgttatggtgtaataattcttgat
gaggctcatgaaagaactttggctacagatattctcatgggtgtcttgaaggaagttgta
aggcagagatcagatctaaaggttatagttatgagtgctactctggatgcaggaaaattt
cagatttacttcgataattgtcctctgttaactattcctggacgtacacatcctgttgag
atcttttatactcctgaaccagagagagattatcttgaagcagcaattcgaacagtgatc
cagatccacatgtgtgaagaggaggagggtgatctacttctcttcttaactggtcaagag
gaaattgatgaagcctgtaagagaataaagcgcgaggttgatgatttgggccctgaagtt
ggtgacattaaaatcattccattgtactctacacttccacctcagcagcaacaacgaatt
tttgagccaccacctccaaaaaaacagaatggagcaatcggaagaaaggtggtggtgtca
actaatattgcagaaacttctttgacaattgatggtgtggtatttgtgattgatcctgga
tttgcaaagcaaaaggtttacaatcctcgaatcagagttgaatctcttttggtgacagca
attagtaaagcttcagctcagcaaagggcgggtcgagctggacgtaccagacctggaaaa
tgctttcggctttacacagagaaagcttacaaaacagaaatgcaggataacacctatcct
gagattctgcgttctaatttaggatcagttgtgttacagttgaagaaacttggtattgat
gatttggtgcattttgattttatggatccaccagctcctgaaactttgatgagagctcta
gaacttttgaattacctggctgctttaaatgatgatggagatctgacggaattgggatcc
atgatggcagagtttcctctcgatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtgtaccacgcttttaaacaaaatcatgaatcc
gttcagtggtgttatgacaacttcattaattaccgatccctgatgtctgcagacaatgta
cgccagcagctatctcgaattatggatagatttaatttgcctcgtcgaagtactgatttt
acaagcagggactattacattaatataagaaaagctttggttactggttattttatgcag
gtggcacatctagaacgaacggggcattatttaactgtgaaggataaccaggtggttcag
ttgcatccctctaccgttcttgatcataagcctgaatgggtgctttataatgagtttgtt
cttacaacaaagaattacatacggacatgtacagatatcaagccggagtggttggtgaaa
attgccccacaatattatgacatgagcaatttcccacagtgtgaagcaaagagacaattg
gaccgcatcattgccaaacttcaatccaaggaatattcacagtactga
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