KEGG   Suncus etruscus (white-toothed pygmy shrew): 126032423
Entry
126032423         CDS       T09902                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:setr03009]
    126032423 (NLE1)
Ribosome biogenesis [BR:setr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    126032423 (NLE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd DSE1_N ANAPC4_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st ASA1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR41 NLE NBCH_WD40 CFAP251_N Beta-prop_DCAF4 PAC11 Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD40_RFWD3 eIF2A Tricorn_2nd TRM82_WD RMC1_N Beta-prop_RIG_1st WD_LRWD1 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Cytochrom_D1 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 126032423
NCBI-ProteinID: XP_049646091
LinkDB
Position
1:complement(168513249..168524050)
AA seq 509 aa
MAAAAAGVRVGAGAALRGALAGVSVAAEGRRREEAAARDVQRLLVQFQDEGGQLLGSPFD
VPVDITPDKLQLVCNALLAQEDPLPLAFYVHDAEIVSSLGKTLESQAVETEKVVDIIYQP
QAIFRVRAVARCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQG
HRHWVLTISWSPDGLKLASGCKNGQILLWDPNTGKQVGRSLTGHSKWITGLSWEPLHMNP
ECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRA
HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINPQDLQGSLQEWKEKALRRYN
LVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDK
SIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPG
HADEVYAVDWSPDGQRVASGGKDKCLRIL
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggccggggtgcgtgtcggggcgggggcggcgctgcggggcgctctg
gccggggtctcggtggccgcggaggggaggcgacgggaagaggcggcggcgcgcgacgtg
cagcggctgctcgtgcagttccaggatgaggggggccagctgctgggctccccgttcgac
gtgcccgtggacatcaccccggacaagttgcagctcgtgtgcaacgcgctgctggcccag
gaagatcccttgccactggctttctatgtccatgatgctgagattgtctcctcgctggga
aagacactggaatcgcaggctgtggagacagagaaagttgtggacatcatctaccagcca
caggctattttccgggtccgagcagtggcccgctgcactagctccttggaggggcacagt
gaggccgtcatttctgtggcttttagccctacaggaaagtacctggccagtggctccggg
gacaccactgtgcgcttctgggatctcagcactgagacgccacacttcacatgtcagggc
cataggcactgggtcctcactatatcctggtccccagacggcctgaagttggcgtcaggc
tgcaagaatggccagattctcttatgggatccaaacacagggaagcaggtgggcaggagc
ctcactggccacagcaagtggatcacagggctgagctgggagccccttcacatgaacccc
gagtgccgctacgtggccagcagctccaaggatggcagtgtgcgggtgtgggacacgact
gcaggccgctgtgagcgtatcctcacggggcacacacagtcggtcacgtgtctccggtgg
ggtggcgatgggctgctctactctgcctcccaggaccgcaccatcaaagtctggcgggct
catgatggtgtgctgtgccggactctgcagggccatggtcactgggtgaacaccatggcg
cttagcactgactacgccctgcgcacaggtgcctttgagcctgctgaggcctcaatcaac
ccccaagatctccagggatccttgcaggagtggaaggagaaggctctgaggcggtataat
ctcgtgaggggccagggccctgagaggctggtgtctggctcagacgacttcaccttattc
ctgtggtcccccgcagaggacaagaagccccttgcacgtatgacaggacaccaggccctc
atcaaccaggtgctcttctcccctgactcccgcatcatcgccagcgcctccttcgacaag
tccattaagctatgggatggcaggacaggcaagtacctggcttccctgcggggccacgtg
gctgccgtgtaccagatcgcttggtctgctgacagccggctcctggtcagcggcagcagt
gacagcacactgaaggtatgggacgtgaaggcccagaagctgtctacagacctgccaggt
catgcagacgaggtatatgctgttgactggagtccagatgggcagagagtggccagtggt
ggcaaggacaaatgtctccggatactttga

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